RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 UBE3DQ7Z6J8 389 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 PXKQ7Z7A4 578 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 IQCHQ86VS3 1027 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 NUDT13Q86X67 352 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 FAM131BQ86XD5 332 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 NPAS3Q8IXF0 933 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 CDK20Q8IZL9 346 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 ARL14Q8N4G2 192 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF283Q8N7M2 679 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 BMPERQ8N8U9 685 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 C19orf47Q8N9M1 422 aaKnown RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 OR51Q1Q8NH59 317 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 HUS1BQ8NHY5 278 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 SPPL2AQ8TCT8 520 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 RNASEH2CQ8TDP1 164 aaKnown RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 FAM151AQ8WW52 585 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 GATAD2BQ8WXI9 593 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 PHYHIPQ92561 330 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 RSC1A1Q92681 617 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 EXT2Q93063 718 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 MASTLQ96GX5 879 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 TPD52L3Q96J77 140 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 MRGPRX4Q96LA9 322 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 WFIKKN1Q96NZ8 548 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 PANX1Q96RD7 426 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 IL4I1Q96RQ9 567 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 CLCC1Q96S66 551 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 PIGQQ9BRB3 760 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 NAA11Q9BSU3 229 aaPredicted RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 FSD1LQ9BXM9 530 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 ACTR3CQ9C0K3 210 aaPredicted RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 OR10A4Q9H209 315 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 C1orf198Q9H425 327 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 RIMS4Q9H426 269 aaPredicted RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 SMOC1Q9H4F8 434 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 FKRPQ9H9S5 495 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 NMNAT1Q9HAN9 279 aaPredicted RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 SPACA1Q9HBV2 294 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 TREM1Q9NP99 234 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 SIRT7Q9NRC8 400 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 MRPL17Q9NRX2 175 aaKnown RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 SERINC1Q9NRX5 453 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 GPATCH2Q9NW75 528 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 TAS2R8Q9NYW2 309 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 DNAJC27Q9NZQ0 273 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 COX16Q9P0S2 106 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 KLHL9Q9P2J3 617 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 ZMYM5Q9UJ78 669 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 LHX6Q9UPM6 363 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 RASD1Q9Y272 281 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 YARS2Q9Y2Z4 477 aaKnown RBP5.55□□□□□ -1.52
LINC01340-201ENST00000504012 FBXO7Q9Y3I1 522 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 ANKRD12Q6UB98 2062 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 LTBP4Q8N2S1 1624 aa5.55□□□□□ -1.52
LINC01340-201ENST00000504012 A0A1B0GTI1 187 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM269A0A1B0GVZ9 245 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SHISA3A0PJX4 238 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 ZNF724A8MTY0 619 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SURF4O15260 269 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 FGF10O15520 208 aaPredicted RBP5.54□□□□□ -1.52
LINC01340-201ENST00000504012 RNF13O43567 381 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 PCDH7O60245 1069 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 FBXO24O75426 580 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 CLDN11O75508 207 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 AIFM1O95831 613 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 ACTL6AO96019 429 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 CD74P04233 296 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 ATP1B1P05026 303 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 CD1AP06126 327 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 ASGR1P07306 291 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 MMP10P09238 476 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 FBXO45P0C2W1 286 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 TPT1P13693 172 aaKnown RBP5.54□□□□□ -1.52
LINC01340-201ENST00000504012 IL11P20809 199 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 GSTM3P21266 225 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 DRD5P21918 477 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 NFYBP25208 207 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 GABRR2P28476 465 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 MC4RP32245 332 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 MTNR1AP48039 350 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 GIPRP48546 466 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 NDUFV1P49821 464 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 AGTR2P50052 363 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 STC1P52823 247 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 MVDP53602 400 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SOX10P56693 466 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 PRSS12P56730 875 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 H2BFSP57053 126 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 PRR5P85299 388 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 HTD2P86397 168 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SSBP1Q04837 148 aaKnown RBP5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SIGLEC14Q08ET2 396 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 SKP2Q13309 424 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 CAPSQ13938 189 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 TMEM132DQ14C87 1099 aa5.54□□□□□ -1.52
LINC01340-201ENST00000504012 RGNQ15493 299 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms