RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TPT1P13693 172 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 NCK1P16333 377 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RPL10P27635 214 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PTGER3P43115 390 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CHRNA4P43681 627 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MTNR1AP48039 350 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GIPRP48546 466 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PGFP49763 221 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RBP2P50120 134 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CDH11P55287 796 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LRRC32Q14392 662 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC9A5Q14940 896 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GPR68Q15743 365 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CDO1Q16878 200 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SV2CQ496J9 727 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SYTL3Q4VX76 610 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 USP39Q53GS9 565 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 DCAF8Q5TAQ9 597 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TBPL2Q6SJ96 375 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC22A25Q6T423 547 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SAMD7Q7Z3H4 446 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SNX29P2Q8IUI4 249 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TMEM192Q8IY95 271 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DTX3Q8N9I9 347 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FAM98AQ8NCA5 519 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 WFIKKN2Q8TEU8 576 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GATAD2BQ8WXI9 593 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 AUTS2Q8WXX7 1259 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 COL26A1Q96A83 441 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LRCH3Q96II8 777 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TSSK3Q96PN8 268 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OMDQ99983 421 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 UBQLN3Q9H347 655 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TUBB1Q9H4B7 451 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DBNDD1Q9H9R9 158 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 GP6Q9HCN6 339 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SEMA3GQ9NS98 782 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 KLHL28Q9NXS3 571 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 KLHL9Q9P2J3 617 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MGAT4CQ9UBM8 478 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 DPP7Q9UHL4 492 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 BCS1LQ9Y276 419 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FBXO7Q9Y3I1 522 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 TMED3Q9Y3Q3 217 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC22A7Q9Y694 548 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NBEAL1Q6ZS30 2694 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LIPT2A6NK58 231 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SUPT3HB4E1H0 165 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 BNIP3LO60238 219 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 AHSA1O95433 338 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MT-CO1P00395 513 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 IGKV3-11P04433 115 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 CD63P08962 238 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZNF7P17097 686 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ITGB8P26012 769 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PPM1FP49593 454 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PCBP4P57723 403 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 MTPNP58546 118 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PSMA6P60900 246 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 UBE2MP61081 183 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 PKIAP61925 76 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 RPL19P84098 196 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 ADGRF1Q5T601 910 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 LINGO2Q7L985 606 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ABHD12BQ7Z5M8 362 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 UBE3DQ7Z6J8 389 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZNF547Q8IVP9 402 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 FAM169BQ8N8A8 192 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 B3GNT7Q8NFL0 401 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 IFI44Q8TCB0 444 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NT5CQ8TCD5 201 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 UPRTQ96BW1 309 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 HPDLQ96IR7 371 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC12A9Q9BXP2 914 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLITRK2Q9H156 845 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 NSUN3Q9H649 340 aaKnown RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 METTL17Q9H7H0 456 aaPredicted RBP2.58□□□□□ -2
NEDD4-204ENST00000503468 AMBNQ9NP70 447 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 ZSCAN32Q9NX65 697 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 OPN4Q9UHM6 478 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 SLC13A4Q9UKG4 626 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 PCDHGA2Q9Y5H1 932 aa2.58□□□□□ -2
NEDD4-204ENST00000503468 MYO9AB2RTY4 2548 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 A0A0A6YYH2 397 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 TRAV19A0A0A6YYK7 116 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 A6NJ64 397 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 VSTM2BA6NLU5 285 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 MAGEB17A8MXT2 336 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 STMND1H3BQB6 276 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 J3QW42 95 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 P2RX6O15547 441 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 GALR3O60755 368 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 STK16O75716 305 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 RAB3DO95716 219 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 RAB36O95755 333 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OPN1LWP04000 364 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 C1GALT1C1LP0DN25 315 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CBLP22681 906 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 AHCYP23526 432 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CTNNB1P35222 781 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms