RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PSMG3-AS1Q96PY0 264 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 TM9SF2Q99805 663 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 ARHGAP21Q5T5U3 1957 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 PTPN13Q12923 2485 aa22.53■■□□□ 1.2
LSM6-202ENST00000502781 SLC22A20A6NK97 555 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 HSPB2A8KAH6 182 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 FMO6PO60774 539 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 RCBTB2O95199 551 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 IL2RAP01589 272 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 CLK1P49759 484 aaKnown RBP22.52■■□□□ 1.2
LSM6-202ENST00000502781 CARD18P57730 90 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 PON3Q15166 354 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 HSPB2Q16082 182 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 SPATS1Q496A3 300 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 LRRC23Q53EV4 343 aaPredicted RBP22.52■■□□□ 1.2
LSM6-202ENST00000502781 ATG4DQ86TL0 474 aaPredicted RBP22.52■■□□□ 1.2
LSM6-202ENST00000502781 CCDC71Q8IV32 467 aaPredicted RBP22.52■■□□□ 1.2
LSM6-202ENST00000502781 ATP6V1C2Q8NEY4 427 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 OR4D11Q8NGI4 311 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 OR6T1Q8NGN1 323 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 OR10Q1Q8NGQ4 319 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 FNDC9Q8TBE3 224 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 ASB5Q8WWX0 329 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 SDCCAG3Q96C92 435 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 ZFP3Q96NJ6 502 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 CDRT15Q96T59 188 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 ZNF559Q9BR84 538 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 TRIM2Q9C040 744 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 COQ3Q9NZJ6 369 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 BAG5Q9UL15 447 aa22.52■■□□□ 1.2
LSM6-202ENST00000502781 M0R3H8 397 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 GGT1P19440 569 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 CHRNB4P30926 498 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 NPTX1Q15818 432 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 SGCBQ16585 318 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 CYBRD1Q53TN4 286 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 SAMD4BQ5PRF9 694 aaKnown RBP22.51■■□□□ 1.19
LSM6-202ENST00000502781 C6orf89Q6UWU4 347 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 OR52E4Q8NGH9 312 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 LILRB4Q8NHJ6 448 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 ARL5BQ96KC2 179 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 PRR14Q9BWN1 585 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 C12orf10Q9HB07 376 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 DOCK7Q96N67 2140 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 ICE1Q9Y2F5 2266 aa22.51■■□□□ 1.19
LSM6-202ENST00000502781 A0A1B0GWA3 101 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 TMEM72A0PK05 275 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 SLC7A1P30825 629 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 RAC3P60763 192 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 MXRA7P84157 204 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 TMPPEQ6ZT21 453 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 RANBP3LQ86VV4 465 aaPredicted RBP22.5■■□□□ 1.19
LSM6-202ENST00000502781 RNF148Q8N7C7 305 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 SRXN1Q9BYN0 137 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 OR11A1Q9GZK7 315 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 PCDHAC1Q9H158 963 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 RNF122Q9H9V4 155 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 PACSIN3Q9UKS6 424 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 A0A1W2PNR3 127 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 GSTA4O15217 222 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 AQP8O94778 261 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 CXCR1P25024 350 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 SELENOWP63302 87 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 ZNF239Q16600 458 aaKnown RBP22.5■■□□□ 1.19
LSM6-202ENST00000502781 RINLQ6ZS11 566 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 RBM45Q8IUH3 476 aaKnown RBP22.5■■□□□ 1.19
LSM6-202ENST00000502781 DNAJA4Q8WW22 397 aaPredicted RBP22.5■■□□□ 1.19
LSM6-202ENST00000502781 PROX1Q92786 737 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 CPNE4Q96A23 557 aaPredicted RBP22.5■■□□□ 1.19
LSM6-202ENST00000502781 OR5B2Q96R09 309 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 C1orf21Q9H246 121 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 TIGARQ9NQ88 270 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 HDGFL3Q9Y3E1 203 aa22.5■■□□□ 1.19
LSM6-202ENST00000502781 COL12A1Q99715 3063 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 A0A0B4J2E0 115 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 A0A1B0GX12 115 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 UBOX5O94941 541 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 CLDN14O95500 239 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 FCGR2AP12318 317 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 NCALDP61601 193 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 CEACAM7Q14002 265 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 OR1Q1Q15612 314 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 LSRQ86X29 649 aaPredicted RBP22.49■■□□□ 1.19
LSM6-202ENST00000502781 LIX1LQ8IVB5 337 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 MCHR1Q99705 422 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 TAS2R1Q9NYW7 299 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 RPS6KB2Q9UBS0 482 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 ZNF629Q9UEG4 869 aaPredicted RBP22.49■■□□□ 1.19
LSM6-202ENST00000502781 MCTS1Q9ULC4 181 aaKnown RBP22.49■■□□□ 1.19
LSM6-202ENST00000502781 SLC9A8Q9Y2E8 581 aa22.49■■□□□ 1.19
LSM6-202ENST00000502781 ZC3H12DA2A288 527 aaKnown RBP22.48■■□□□ 1.19
LSM6-202ENST00000502781 NPIPB7O75200 414 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 CLDN1O95832 211 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 IL18BPO95998 194 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 CRHP06850 196 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 TFPIP10646 304 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 NCK1P16333 377 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 CCNA2P20248 432 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 CTSSP25774 331 aa22.48■■□□□ 1.19
LSM6-202ENST00000502781 DIO1P49895 249 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms