RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 TSEN54Q7Z6J9 526 aaKnown RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 ZNF605Q86T29 641 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 ATG4DQ86TL0 474 aaPredicted RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 GGNQ86UU5 652 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 CYP4Z1Q86W10 505 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 P3H2Q8IVL5 708 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 GALNT11Q8NCW6 608 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 FAM57AQ8TBR7 257 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 PHF10Q8WUB8 498 aaKnown RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 DNAJA4Q8WW22 397 aaPredicted RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 SLC41A3Q96GZ6 507 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 OR5B2Q96R09 309 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 RIMS3Q9UJD0 308 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 AURKCQ9UQB9 309 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 FAM32AQ9Y421 112 aaKnown RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 SPIN1Q9Y657 262 aaPredicted RBP10.72□□□□□ -0.69
CUX1-210ENST00000497815 ENPP4Q9Y6X5 453 aa10.72□□□□□ -0.69
CUX1-210ENST00000497815 TRGV8A0A0C4DH27 118 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 A0A0J9YW62 118 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 A0A1W2PNR3 127 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 DHRS12A0PJE2 317 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 ZC3H12DA2A288 527 aaKnown RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 AQP12BA6NM10 295 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 OR5F1O95221 314 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 FABP3P05413 133 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PNMTP11086 282 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 CPN1P15169 458 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 NQO1P15559 274 aaKnown RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 EIF1AXP47813 144 aaKnown RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 CLDN15P56746 228 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 CHRNB3Q05901 458 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 BCL2A1Q16548 175 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 EIF2S3LQ2VIR3 472 aaKnown RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 FAM98BQ52LJ0 330 aaKnown RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 SYT14P1Q58G82 188 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 EMC4Q5J8M3 183 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 C1QL3Q5VWW1 255 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PLXDC2Q6UX71 529 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 ZDHHC21Q8IVQ6 265 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 AQP12AQ8IXF9 295 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PM20D2Q8IYS1 436 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 ADGRG5Q8IZF4 528 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PRR7Q8TB68 274 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 SLC25A43Q8WUT9 341 aaPredicted RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 DDIT4LQ96D03 193 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 C7orf34Q96L11 122 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PRRC1Q96M27 445 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 KLHL15Q96M94 604 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 RAB3IPQ96QF0 476 aaPredicted RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 ZNF300Q96RE9 604 aaPredicted RBP10.71□□□□□ -0.69
CUX1-210ENST00000497815 FNDC11Q9BVV2 318 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PRDM14Q9GZV8 571 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 NDUFAF4Q9P032 175 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 TINAGQ9UJW2 476 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 A4GNTQ9UNA3 340 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 ZNF835Q9Y2P0 537 aa10.71□□□□□ -0.69
CUX1-210ENST00000497815 PCNX3Q9H6A9 2034 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 A0A087WUJ7 227 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 GJE1A6NN92 205 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 KPNA4O00629 521 aaPredicted RBP10.7□□□□□ -0.7
CUX1-210ENST00000497815 FFAR1O14842 300 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CHP2O43745 196 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CXCL13O43927 109 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 LYPD3O95274 346 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 ITGA2P17301 1181 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 FUT4P22083 530 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 IFNA8P32881 189 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CASP6P55212 293 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CCNIQ14094 377 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 SGCBQ16585 318 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
CUX1-210ENST00000497815 HBMQ6B0K9 141 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 WDR88Q6ZMY6 472 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CHMP1BQ7LBR1 199 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 DOLPP1Q86YN1 238 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 NKAIN4Q8IVV8 208 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 OR10D3Q8NH80 312 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 OR2V1Q8NHB1 315 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 CANT1Q8WVQ1 401 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 SLC38A4Q969I6 547 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
CUX1-210ENST00000497815 ARL5BQ96KC2 179 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 TRIB1Q96RU8 372 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 PIP5K1AQ99755 562 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 TUBA1CQ9BQE3 449 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 POLR2J2Q9GZM3 115 aaKnown RBP10.7□□□□□ -0.7
CUX1-210ENST00000497815 POLR2J3Q9H1A7 115 aaKnown RBP10.7□□□□□ -0.7
CUX1-210ENST00000497815 MAGIXQ9H6Y5 334 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 IL1RAPQ9NPH3 570 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 PRDM4Q9UKN5 801 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 TESMINQ9Y4I5 508 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 KALRNO60229 2985 aa10.7□□□□□ -0.7
CUX1-210ENST00000497815 IGKV1D-42A0A075B6H8 117 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 TCRBV3S1A0A5B6 114 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 FIGNL2A6NMB9 653 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 A8MVM7 634 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms