RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 LSMEM1Q8N8F7 131 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF527Q8NB42 609 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM255BQ8WV15 326 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TRUB1Q8WWH5 349 aaKnown RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SGCDQ92629 289 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TP53INP1Q96A56 240 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TMIGD2Q96BF3 282 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 EFHD2Q96C19 240 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 GAL3ST4Q96RP7 486 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 NODALQ96S42 347 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 TUBA1CQ9BQE3 449 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 WDR54Q9H977 334 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SLC25A19Q9HC21 320 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 VCX3AQ9NNX9 186 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 PAK1IP1Q9NWT1 392 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 FLRT3Q9NZU0 649 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF223Q9UK11 482 aaPredicted RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 NXT1Q9UKK6 140 aaKnown RBP18.05■□□□□ 0.48
ACTN4-208ENST00000497637 SNX5Q9Y5X3 404 aa18.05■□□□□ 0.48
ACTN4-208ENST00000497637 A0A1B0GWA3 101 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 PRSS44E7EML9 344 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 PTGES3LE9PB15 166 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 H3BN98 237 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 PRKNO60260 465 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-208ENST00000497637 TSPAN2O60636 221 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 REM1O75628 298 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 SOX14O95416 240 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 NTN1O95631 604 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 KLK3P07288 261 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-208ENST00000497637 NR0B1P51843 470 aaKnown RBP18.04■□□□□ 0.48
ACTN4-208ENST00000497637 CDK5Q00535 292 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 SMN1Q16637 294 aaKnown RBP18.04■□□□□ 0.48
ACTN4-208ENST00000497637 GPR141Q7Z602 305 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 KIF18BQ86Y91 864 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 NRMQ8IXM6 262 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 CISD2Q8N5K1 135 aaKnown RBP18.04■□□□□ 0.48
ACTN4-208ENST00000497637 FAM71CQ8NEG0 241 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 B3GNT7Q8NFL0 401 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 MPP4Q96JB8 637 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 ERVK-18Q9QC07 812 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 ITGB1BP2Q9UKP3 347 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 PCDHGB1Q9Y5G3 927 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 CEPT1Q9Y6K0 416 aa18.04■□□□□ 0.48
ACTN4-208ENST00000497637 FER1L5A0AVI2 2057 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 IGHV3-20A0A0C4DH32 117 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 SH3D21A4FU49 640 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CHP2O43745 196 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 NGFRP08138 427 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 GIPRP48546 466 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 FOXL2P58012 376 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 PRKCDQ05655 676 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 GINS1Q14691 196 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 WDR88Q6ZMY6 472 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 PTCHD4Q6ZW05 846 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 MRGPREQ86SM8 312 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CCDC103Q8IW40 242 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CLDN22Q8N7P3 220 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 POGLUT1Q8NBL1 392 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 FDCSPQ8NFU4 85 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM239Q8WW34 195 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 FAM46AQ96IP4 442 aaKnown RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 WDR77Q9BQA1 342 aaPredicted RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CRB3Q9BUF7 120 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 EXOSC3Q9NQT5 275 aaKnown RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 FKBP14Q9NWM8 211 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 CLN6Q9NWW5 311 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 C19orf25Q9UFG5 118 aaPredicted RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 GPN3Q9UHW5 284 aaPredicted RBP18.03■□□□□ 0.48
ACTN4-208ENST00000497637 PSORS1C1Q9UIG5 152 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 B3GNT3Q9Y2A9 372 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM5Q9Y2B1 443 aa18.03■□□□□ 0.48
ACTN4-208ENST00000497637 SCDO00767 359 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 LRRTM2O43300 516 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PIP5K1CO60331 668 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 ADAM11O75078 769 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 ENDOUP21128 410 aaKnown RBP18.02■□□□□ 0.48
ACTN4-208ENST00000497637 RBM34P42696 430 aaKnown RBP18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PNLIPRP2P54317 469 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 RNF4P78317 190 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PIGFQ07326 219 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PMS2P3Q13401 168 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PLEKHN1Q494U1 663 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-208ENST00000497637 TMEM201Q5SNT2 666 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 PAPD4Q6PIY7 484 aaKnown RBP18.02■□□□□ 0.48
ACTN4-208ENST00000497637 CASP12Q6UXS9 341 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 ZNF540Q8NDQ6 660 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 ST6GALNAC3Q8NDV1 305 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 OR8K3Q8NH51 312 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 NUBPLQ8TB37 319 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 OMA1Q96E52 524 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 VMP1Q96GC9 406 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 SMAD5Q99717 465 aaKnown RBP18.02■□□□□ 0.48
ACTN4-208ENST00000497637 GPR83Q9NYM4 423 aa18.02■□□□□ 0.48
ACTN4-208ENST00000497637 ANKHD1Q8IWZ3 2542 aaKnown RBP18.01■□□□□ 0.47
ACTN4-208ENST00000497637 H3BSA7 217 aa18.01■□□□□ 0.47
ACTN4-208ENST00000497637 RGS10O43665 173 aa18.01■□□□□ 0.47
ACTN4-208ENST00000497637 HPGDP15428 266 aa18.01■□□□□ 0.47
ACTN4-208ENST00000497637 IL12BP29460 328 aa18.01■□□□□ 0.47
ACTN4-208ENST00000497637 SMSP52788 366 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms