RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 KIF18AQ8NI77 898 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 PIGXQ8TBF5 258 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 SLC25A43Q8WUT9 341 aaPredicted RBP8.48□□□□□ -1.05
UBR4-216ENST00000494503 XAGE5Q8WWM1 108 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 FBXO17Q96EF6 278 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 APOPT1Q96IL0 206 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 KCNS3Q9BQ31 491 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 INPP5KQ9BT40 448 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 BHLHE41Q9C0J9 482 aaPredicted RBP8.48□□□□□ -1.05
UBR4-216ENST00000494503 OR11A1Q9GZK7 315 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 NMUR2Q9GZQ4 415 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 OR51I1Q9H343 314 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 FKRPQ9H9S5 495 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 CTPS2Q9NRF8 586 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 CHRNA9Q9UGM1 479 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 PMF1-BGLAPU3KQ54 211 aa8.48□□□□□ -1.05
UBR4-216ENST00000494503 ATP6V1G2-DDX39BF2Z307 99 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 KIAA0513O60268 411 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 NPHS1O60500 1241 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 FCMRO60667 390 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 KRT33AO76009 404 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 C8BP07358 591 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 OR12D1P0DN82 309 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 G6PDP11413 515 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 USF1P22415 310 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 CHI3L1P36222 383 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 IFFO1Q0D2I5 559 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 IQCCQ4KMZ1 466 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 SLC25A53Q5H9E4 307 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 EXOSC6Q5RKV6 272 aaKnown RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 C6orf136Q5SQH8 315 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ABLIM2Q6H8Q1 611 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 OR4F3Q6IEY1 312 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 OR7E24Q6IFN5 339 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 B3GLCTQ6Y288 498 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 DNAJC14Q6Y2X3 702 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 DNM1P46Q6ZS02 220 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ANKRD46Q86W74 232 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 LSRQ86X29 649 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 CCDC103Q8IW40 242 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 NATD1Q8N6N6 113 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ARIH2OSQ8N7S6 290 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ZNF75CPQ92670 426 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 RAB8BQ92930 207 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ARL5BQ96KC2 179 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 C3orf30Q96M34 536 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 VRK1Q99986 396 aaPredicted RBP8.47□□□□□ -1.05
UBR4-216ENST00000494503 PIMREGQ9BSJ6 248 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 PPCSQ9HAB8 311 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 SLC17A7Q9P2U7 560 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 LPAR3Q9UBY5 353 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 KCNS2Q9ULS6 477 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 WDR45Q9Y484 360 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 SLC25A15Q9Y619 301 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 FKBP7Q9Y680 259 aa8.47□□□□□ -1.05
UBR4-216ENST00000494503 ARFGEF3Q5TH69 2177 aa8.46□□□□□ -1.05
UBR4-216ENST00000494503 LOC100289279A0A1B0GTE1 492 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ESPNB1AK53 854 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 NPIPB9F8W1W9 429 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ANKRD28O15084 1053 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 LMX1BO60663 402 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 UGT2B17O75795 530 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 PGM3O95394 542 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 FGF4P08620 206 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 CSF3P09919 207 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 HNF1AP20823 631 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 APOBEC1P41238 236 aaKnown RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 IDH2P48735 452 aaKnown RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 KHKP50053 298 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 FOXG1P55316 489 aaPredicted RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 SNRPD2P62316 118 aaKnown RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 VLDLRP98155 873 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 TGFBR3Q03167 851 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 LOXL1Q08397 574 aaPredicted RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 MAD2L1Q13257 205 aaPredicted RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 ZNF141Q15928 474 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 PDCD2Q16342 344 aaPredicted RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 C11orf71Q6IPW1 123 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 FAM166AQ6J272 317 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ZNF544Q6NX49 715 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 VHLLQ6RSH7 139 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 RNF165Q6ZSG1 346 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 SLC46A3Q7Z3Q1 461 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 GRINAQ7Z429 371 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 GPAT4Q86UL3 456 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ARFGAP2Q8N6H7 521 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 OR10H5Q8NGA6 315 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 DDIT4LQ96D03 193 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 NAA11Q9BSU3 229 aaPredicted RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 TXLNGYQ9BZA5 131 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 SERHL2Q9H4I8 314 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ACER3Q9NUN7 267 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
UBR4-216ENST00000494503 KCNE5Q9UJ90 142 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 SLC35A3Q9Y2D2 325 aa8.46□□□□□ -1.06
UBR4-216ENST00000494503 ANK3Q12955 4377 aaKnown RBP8.45□□□□□ -1.06
UBR4-216ENST00000494503 IGKV3D-15A0A087WSY6 115 aa8.45□□□□□ -1.06
UBR4-216ENST00000494503 CLDN24A6NM45 220 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms