RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 BMP2P12643 396 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 EDNRAP25101 427 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 AQP1P29972 269 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ARFIP2P53365 341 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 MTPNP58546 118 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 HOXC5Q00444 222 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 RASGEF1BQ0VAM2 473 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 SERPINA11Q86U17 422 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 CDC20BQ86Y33 519 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 STON2Q8WXE9 905 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 PSD2Q9BQI7 771 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 CPPED1Q9BRF8 314 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 SIKE1Q9BRV8 207 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 SLC39A3Q9BRY0 314 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 MED18Q9BUE0 208 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 RSPO3Q9BXY4 272 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 PLSCR4Q9NRQ2 329 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 GLRX2Q9NS18 164 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ELOVL5Q9NYP7 299 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 NDRG3Q9UGV2 375 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 ING1Q9UK53 422 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 TESMINQ9Y4I5 508 aa13.09□□□□□ -0.31
ATG4B-224ENST00000494132 SPIN1Q9Y657 262 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-224ENST00000494132 A0A1W2PPR1 153 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 ZNF814B7Z6K7 855 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 C16orf97H3BN30 126 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 RAMP1O60894 148 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 PGM3O95394 542 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 ACAA2P42765 397 aaKnown RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 POLR2HP52434 150 aaKnown RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 CDK6Q00534 326 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 BNIP2Q12982 314 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 NFYCQ13952 458 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 CAPRIN1Q14444 709 aaKnown RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 DAZAP2Q15038 168 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 RNPS1Q15287 305 aaKnown RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 RUNDC3AQ59EK9 446 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 COMTD1Q86VU5 262 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 BBS10Q8TAM1 723 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 SLC25A43Q8WUT9 341 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 PMM1Q92871 262 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 DACH2Q96NX9 599 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 SPATA9Q9BWV2 254 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
ATG4B-224ENST00000494132 BCL2L10Q9HD36 194 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 TACC2O95359 2948 aa13.08□□□□□ -0.32
ATG4B-224ENST00000494132 ROS1P08922 2347 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 DSCAMO60469 2012 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 ENO4A6NNW6 628 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 EVPLLA8MZ36 301 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 CASKO14936 926 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 SIAH2O43255 324 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 CYTIPO60759 359 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 HRGP04196 525 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 YES1P07947 543 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 THBS1P07996 1170 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 IMPDH2P12268 514 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 UQCRBP14927 111 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 GPX2P18283 190 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 PPIBP23284 216 aaKnown RBP13.07□□□□□ -0.32
ATG4B-224ENST00000494132 DNAJA1P31689 397 aaKnown RBP13.07□□□□□ -0.32
ATG4B-224ENST00000494132 SLC1A3P43003 542 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 HTR3AP46098 478 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 OR2B6P58173 313 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 CSNK2A1P68400 391 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-224ENST00000494132 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-224ENST00000494132 SCARB2Q14108 478 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 GLIPR1L2Q4G1C9 344 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 TFAP2EQ6VUC0 442 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 STAC2Q6ZMT1 411 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 CCDC103Q8IW40 242 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 ZNF440Q8IYI8 595 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 CGREF1Q99674 301 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 TMEM45AQ9NWC5 275 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 KLHL9Q9P2J3 617 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 PRSS50Q9UI38 385 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 PLEKHA6Q9Y2H5 1048 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 PRRC2AP48634 2157 aaKnown RBP13.07□□□□□ -0.32
ATG4B-224ENST00000494132 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
ATG4B-224ENST00000494132 FAAHO00519 579 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 FBP2O00757 339 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 TPST1O60507 370 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 COPZ1P61923 177 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 REEP3Q6NUK4 255 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 BEND4Q6ZU67 534 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-224ENST00000494132 SLC43A2Q8N370 569 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 DPP10Q8N608 796 aa13.06□□□□□ -0.32
ATG4B-224ENST00000494132 DDIT4LQ96D03 193 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms