RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 VN1R2Q8NFZ6 395 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 SLC38A5Q8WUX1 472 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 FAM183AA6NL82 134 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 SLC6A11P48066 632 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ALDH3B2P48448 385 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF610Q8N9Z0 462 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 TSPAN10Q9H1Z9 355 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 LOC105369274A0A096LPK9 316 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ARHGAP33O14559 1287 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 SLC16A6O15403 523 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 FURINP09958 794 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 MTFR2Q6P444 385 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 OR4N4Q8N0Y3 316 aa17.87■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF578Q96N58 590 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 INSM2Q96T92 566 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 WDR83Q9BRX9 315 aaKnown RBP17.87■□□□□ 0.45
COL27A1-207ENST00000494090 HMX2A2RU54 273 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 AQP9O43315 295 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ARSBP15848 533 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 POLR2IP36954 125 aaKnown RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 EIF2DP41214 584 aaKnown RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 RRADP55042 308 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 C3orf38Q5JPI3 329 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 RPL3LQ92901 407 aaKnown RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 TOMM40LQ969M1 308 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 BORCS7Q96B45 105 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ZNF649Q9BS31 505 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 B3GNT2Q9NY97 397 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 MAST2Q6P0Q8 1798 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 GYPBP06028 91 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ACPPP15309 386 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ETV6P41212 452 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 USF2Q15853 346 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 FAM78AQ5JUQ0 283 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 EGLN3Q9H6Z9 239 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 DNMT3BQ9UBC3 853 aaKnown RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ALDOBP05062 364 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 KCNJ10P78508 379 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 UHRF1Q96T88 793 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 CENPOQ9BU64 300 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 SLC6A20Q9NP91 592 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 RAD1O60671 282 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 SLC35F3Q8IY50 421 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 FAM160A2Q8N612 972 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-207ENST00000494090 OR1S1Q8NH92 325 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 RLIMQ9NVW2 624 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 ASIC5Q9NY37 505 aa17.86■□□□□ 0.45
COL27A1-207ENST00000494090 RPS5P46782 204 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 RPL22L1Q6P5R6 122 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 S100A7AQ86SG5 101 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 SERPINA12Q8IW75 414 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 FAM83FQ8NEG4 500 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 KCTD12Q96CX2 325 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 HCSTQ9UBK5 93 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 CHRNEQ04844 493 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 ILKQ13418 452 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 DCAF12Q5T6F0 453 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 OR2G6Q5TZ20 316 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 ULBP2Q9BZM5 246 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 OBP2AQ9NY56 170 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 MYEF2Q9P2K5 600 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 C2orf72A6NCS6 295 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 A6NL46 340 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 B4DXG7 233 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 SLC43A1O75387 559 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 KNG1P01042 644 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 SCG5P05408 212 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 DCNP07585 359 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 GIFP27352 417 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 PXNP49023 591 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 EFNA3P52797 238 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 FXYD4P59646 89 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 RBM39Q14498 530 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 LTB4RQ15722 352 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 PLK5Q496M5 336 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 ELP2Q6IA86 826 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 SDHAF2Q9NX18 166 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 B3GALT1Q9Y5Z6 326 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 H3BNC9 293 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 TAPBPO15533 448 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 SLC16A7O60669 478 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 AQP2P41181 271 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 GPR176Q14439 515 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 P2RY14Q15391 338 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 STK11Q15831 433 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 C19orf47Q8N9M1 422 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 GIMAP5Q96F15 307 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 MICU1Q9BPX6 476 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 USB1Q9BQ65 265 aaKnown RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 OTOL1A6NHN0 477 aaPredicted RBP17.85■□□□□ 0.45
COL27A1-207ENST00000494090 H0YGG7 62 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 RAB40ALP0C0E4 278 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 TNFRSF17Q02223 184 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 MGAT3Q09327 533 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 RAB40AQ8WXH6 277 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 DCUN1D4Q92564 292 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 NICN1Q9BSH3 213 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 MFFQ9GZY8 342 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 ATPIF1Q9UII2 106 aa17.85■□□□□ 0.45
COL27A1-207ENST00000494090 PCDHB10Q9UN67 800 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms