RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ELK4P28324 431 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 SNRPD2P62316 118 aaKnown RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 VLDLRP98155 873 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 PMP22Q01453 160 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 HEPACAMQ14CZ8 416 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 CTF1Q16619 201 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF630Q2M218 657 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 FAM74A3Q4VXF1 159 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF549Q6P9A3 640 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 EIF3MQ7L2H7 374 aaKnown RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 BIVMQ86UB2 503 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 MYPOPQ86VE0 399 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 CYP4Z1Q86W10 505 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 THOC6Q86W42 341 aaKnown RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 VRK3Q8IV63 474 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 ZBTB2Q8N680 514 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 SIDT2Q8NBJ9 832 aaKnown RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 RCBTB1Q8NDN9 531 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 CPNE1Q99829 537 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 NUAK2Q9H093 628 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 CDC42EP4Q9H3Q1 356 aaKnown RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 ACSS1Q9NUB1 689 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-222ENST00000493919 GALPQ9UBC7 116 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 IL20RAQ9UHF4 553 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 CLCA2Q9UQC9 943 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 ASF1AQ9Y294 204 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 U3KQV3 271 aa10.74□□□□□ -0.69
BRCA1-222ENST00000493919 IGHV1OR21-1A0A087WYE8 117 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 HMX2A2RU54 273 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 D6RAR5 112 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 E7ENX8 843 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 DUX1O43812 170 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 NPHS1O60500 1241 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 LALBAP00709 142 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 PNLIPP16233 465 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 SAT1P21673 171 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 CCNOP22674 350 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 AOAHP28039 575 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 RPS7P62081 194 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 SNRPEP62304 92 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 EXOSC2Q13868 293 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 NRF1Q16656 503 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 FBXW9Q5XUX1 488 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 VHLLQ6RSH7 139 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 LRRN1Q6UXK5 716 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 MRPL52Q86TS9 123 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 PAQR7Q86WK9 346 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 ARMC10Q8N2F6 343 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 BVESQ8NE79 360 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 OR10G6Q8NH81 332 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 TFGQ92734 400 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 KCNJ9Q92806 393 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 SLAMF9Q96A28 289 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 C14orf79Q96F83 325 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 MARS2Q96GW9 593 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 PDLIM5Q96HC4 596 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 SENP5Q96HI0 755 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 GPR21Q99679 349 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 CMSS1Q9BQ75 279 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 NUDT22Q9BRQ3 303 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 AARSD1Q9BTE6 412 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 PCBD2Q9H0N5 130 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 ALG2Q9H553 416 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 NOL11Q9H8H0 719 aaKnown RBP10.73□□□□□ -0.69
BRCA1-222ENST00000493919 PARPBPQ9NWS1 579 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 TRPC4Q9UBN4 977 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 NDOR1Q9UHB4 597 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 ING4Q9UNL4 249 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 CELSR3Q9NYQ7 3312 aa10.73□□□□□ -0.69
BRCA1-222ENST00000493919 LILRA5A6NI73 299 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 NPIPA7E9PJI5 369 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 K7EP13 123 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CHST10O43529 356 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 HPGDSO60760 199 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MRPS14O60783 128 aaKnown RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 VPS26AO75436 327 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MPOP05164 745 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MELTFP08582 738 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SPARCP09486 303 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 NPIPA8P0DM63 369 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 HIST1H1BP16401 226 aaKnown RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 EPHA3P29320 983 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 PTPN6P29350 595 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MC5RP33032 325 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF81P51508 661 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CLCN7P51798 805 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 PLA2G16P53816 162 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 TNFRSF17Q02223 184 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MAD2L1Q13257 205 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CHI3L2Q15782 390 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SNAPC1Q16533 368 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 TTLL9Q3SXZ7 439 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SOWAHCQ53LP3 525 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 FAHD2BQ6P2I3 314 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms