RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 PRRC2AP48634 2157 aaKnown RBP13.31□□□□□ -0.28
TOM1-215ENST00000491987 ZNF469Q96JG9 3925 aaPredicted RBP13.31□□□□□ -0.28
TOM1-215ENST00000491987 TMED7-TICAM2A0A0A6YYA0 188 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ZNF724A8MTY0 619 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ZNF814B7Z6K7 855 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 TGDSO95455 350 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 PMS2P2O95744 297 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 TACR3P29371 465 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 HTR3AP46098 478 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 POLR2HP52434 150 aaKnown RBP13.3□□□□□ -0.28
TOM1-215ENST00000491987 CRISP3P54108 245 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 AQP5P55064 265 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 OR2B6P58173 313 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 EPS8Q12929 822 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 SFRP5Q5T4F7 317 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ABLIM2Q6H8Q1 611 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ZNF836Q6ZNA1 936 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ZNF704Q6ZNC4 412 aaPredicted RBP13.3□□□□□ -0.28
TOM1-215ENST00000491987 MTDHQ86UE4 582 aaKnown RBP13.3□□□□□ -0.28
TOM1-215ENST00000491987 GOLGA6L1Q8N7Z2 621 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 SLC38A5Q8WUX1 472 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 KISS1RQ969F8 398 aaPredicted RBP13.3□□□□□ -0.28
TOM1-215ENST00000491987 ZHX1-C8orf76Q96EF9 292 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 PLPPR2Q96GM1 343 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 TMEM19Q96HH6 336 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 CCL19Q99731 98 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 HDHD5Q9BXW7 423 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
TOM1-215ENST00000491987 CALML5Q9NZT1 146 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 OSGIN1Q9UJX0 560 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 TMED7Q9Y3B3 224 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 HDGFL3Q9Y3E1 203 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 PCDHB14Q9Y5E9 798 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 ABCA4P78363 2273 aa13.3□□□□□ -0.28
TOM1-215ENST00000491987 MED13LQ71F56 2210 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 TMEM72A0PK05 275 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 TMEM247A6NEH6 219 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 NR5A2O00482 541 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 FAAHO00519 579 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 PLAUP00749 431 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 NUDT7P0C024 238 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 GKN3PP0CG01 181 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 UQCRBP14927 111 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 FPR1P21462 350 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 HOXC12P31275 282 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 SLC1A3P43003 542 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 CLK1P49759 484 aaKnown RBP13.29□□□□□ -0.28
TOM1-215ENST00000491987 NR1H2P55055 460 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 RIPPLY3P57055 190 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 NKX6-1P78426 367 aaPredicted RBP13.29□□□□□ -0.28
TOM1-215ENST00000491987 ITGADQ13349 1161 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 P2RY6Q15077 328 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 TAB1Q15750 504 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 C20orf204Q6ZNR8 217 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 Q6ZT83 130 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 BHLHA15Q7RTS1 189 aaPredicted RBP13.29□□□□□ -0.28
TOM1-215ENST00000491987 GALNT5Q7Z7M9 940 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 FUNDC1Q8IVP5 155 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 ZNF100Q8IYN0 542 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 PIGTQ969N2 578 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 INTS9Q9NV88 658 aaKnown RBP13.29□□□□□ -0.28
TOM1-215ENST00000491987 EMC3Q9P0I2 261 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 ZNF443Q9Y2A4 671 aaPredicted RBP13.29□□□□□ -0.28
TOM1-215ENST00000491987 ITPR3Q14573 2671 aa13.29□□□□□ -0.28
TOM1-215ENST00000491987 IGKV3D-15A0A087WSY6 115 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 A0A096LPI6 279 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 CDHR4A6H8M9 788 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 ZNF716A6NP11 495 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 CLIC1O00299 241 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 DNPH1O43598 174 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 RAMP1O60894 148 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 SMPD2O60906 423 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 LYZL6O75951 148 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 IGHV3-9P01782 118 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 IMPDH2P12268 514 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 HOXB9P17482 250 aaPredicted RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 FKBP2P26885 142 aaKnown RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 CAPRIN1Q14444 709 aaKnown RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 PDK3Q15120 406 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 RGNQ15493 299 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 BLOC1S3Q6QNY0 202 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 HDXQ7Z353 690 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 KRTAP1-3Q8IUG1 177 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 ZNF440Q8IYI8 595 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 PIGXQ8TBF5 258 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 CACYBPQ9HB71 228 aaKnown RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
TOM1-215ENST00000491987 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 TMEM181Q9P2C4 612 aa13.28□□□□□ -0.28
TOM1-215ENST00000491987 NOSIPQ9Y314 301 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms