RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PCYT1AP49585 367 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 MVDP53602 400 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 OR2B6P58173 313 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ITGADQ13349 1161 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 VEZF1Q14119 521 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 RNPS1Q15287 305 aaKnown RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF672Q499Z4 452 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ABLIM2Q6H8Q1 611 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 C3orf33Q6P1S2 294 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF621Q6ZSS3 439 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 TMPPEQ6ZT21 453 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 EIF3MQ7L2H7 374 aaKnown RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 COMTD1Q86VU5 262 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 UBE2J2Q8N2K1 259 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF433Q8N7K0 673 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF611Q8N823 705 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 PIWIL2Q8TC59 973 aaKnown RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 MIPOL1Q8TD10 442 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 SMAP2Q8WU79 429 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 MOAP1Q96BY2 351 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 NEURL3Q96EH8 262 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 PANX1Q96RD7 426 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 TACO1Q9BSH4 297 aaKnown RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 PRR14Q9BWN1 585 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 TRIM2Q9C040 744 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 SAP130Q9H0E3 1048 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 GLRX2Q9NS18 164 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ACER3Q9NUN7 267 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF701Q9NV72 531 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 PAQR5Q9NXK6 330 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 STOML1Q9UBI4 398 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 SEC14L4Q9UDX3 406 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ARID1AO14497 2285 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TMED7-TICAM2A0A0A6YYA0 188 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 E7EQL1 145 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 OVOL3O00110 214 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ABCD4O14678 606 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 BIRC5O15392 142 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 AKR7A3O95154 331 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CD3EP07766 207 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ITGA5P08648 1049 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 KRT16P08779 473 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CDH2P19022 906 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 PGCP20142 388 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TACR3P29371 465 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 KHKP50053 298 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TUBA1BP68363 451 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TUBA4AP68366 448 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 IRX1P78414 480 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 KCNJ10P78508 379 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 MAD2L1Q13257 205 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 P2RY6Q15077 328 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 PPA1Q15181 289 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CLEC12BQ2HXU8 276 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 MRPL2Q5T653 305 aaKnown RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TSPO2Q5TGU0 170 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 DMRTA1Q5VZB9 504 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 NXNQ6DKJ4 435 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF836Q6ZNA1 936 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 Q6ZT83 130 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TUBA1AQ71U36 451 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 LINGO2Q7L985 606 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF100Q8IYN0 542 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 KDM8Q8N371 416 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CLIP4Q8N3C7 705 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM99Q8N816 258 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 STEAP2Q8NFT2 490 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ST8SIA1Q92185 356 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 MAL2Q969L2 176 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 FBXW5Q969U6 566 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TESCQ96BS2 214 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CCDC115Q96NT0 180 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF385AQ96PM9 386 aaKnown RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 OR52E6Q96RD3 313 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 SEC61A2Q9H9S3 476 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TIGARQ9NQ88 270 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 SLC7A10Q9NS82 523 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 EXD2Q9NVH0 621 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 KLHL9Q9P2J3 617 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 CHRNA9Q9UGM1 479 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 HAO1Q9UJM8 370 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 OSGIN1Q9UJX0 560 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 RAB21Q9UL25 225 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 PCDHGB4Q9UN71 923 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 TMED7Q9Y3B3 224 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ABCA2Q9BZC7 2435 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 YLPM1P49750 1951 aaKnown RBP7.84□□□□□ -1.15
HDAC3-211ENST00000491581 DNHD1Q96M86 4753 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ROS1P08922 2347 aa7.84□□□□□ -1.15
HDAC3-211ENST00000491581 ZANQ9Y493 2812 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 IGHV4-30-2A0A087WSY4 118 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 A0A1W2PP18 115 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 AGAP5A6NIR3 686 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 DUXAA6NLW8 204 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 GJE1A6NN92 205 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 M0R1B8 84 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 KLF11O14901 512 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 TM9SF1O15321 606 aa7.83□□□□□ -1.16
HDAC3-211ENST00000491581 SSX4O60224 188 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms