RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SPIN1	Q9Y657	262 aa	Predicted RBP	16.75	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	NPIPB9	F8W1W9	429 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	AKAP10	O43572	662 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PMS2P2	O95744	297 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	FKBP2	P26885	142 aa	Known RBP	16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	MPG	P29372	298 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	APOBEC1	P41238	236 aa	Known RBP	16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SLC1A3	P43003	542 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	HILS1	P60008	231 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KIAA0040	Q15053	153 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZNF385B	Q569K4	471 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	UBASH3B	Q8TF42	649 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SLC38A2	Q96QD8	506 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PAFAH2	Q99487	392 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KATNB1	Q9BVA0	655 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ACTRT3	Q9BYD9	372 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	OBP2B	Q9NPH6	170 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ACER3	Q9NUN7	267 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TMEM216	Q9P0N5	145 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	FAF1	Q9UNN5	650 aa	Predicted RBP	16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	HDGFL3	Q9Y3E1	203 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	GRIP1	Q9Y3R0	1128 aa		16.74	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SERINC4	A6NH21	518 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KLF11	O14901	512 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DNAJA2	O60884	412 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CRCP	O75575	148 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CYP7B1	O75881	506 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	RGS9	O75916	674 aa	Predicted RBP	16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KHK	P50053	298 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	RIN1	Q13671	783 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CCNI	Q14094	377 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	VHLL	Q6RSH7	139 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CCDC103	Q8IW40	242 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	FUT8	Q9BYC5	575 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	HIF1AN	Q9NWT6	349 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	NINJ2	Q9NZG7	142 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZNF180	Q9UJW8	692 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SLC9A8	Q9Y2E8	581 aa		16.73	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	IGHV1-18	A0A0C4DH31	117 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334		A0A0G2JK05	382 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	NPIPB8	E9PQR5	432 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334		H3BQF6	201 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KRT16	P08779	473 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CLK1	P49759	484 aa	Known RBP	16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TRIP10	Q15642	601 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	AWAT1	Q58HT5	328 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TSPO2	Q5TGU0	170 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TEX29	Q8N6K0	151 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CCNYL1	Q8N7R7	359 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	OR4F15	Q8NGB8	312 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TMEM186	Q96B77	213 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	BOD1	Q96IK1	185 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SPEF1	Q9Y4P9	236 aa		16.72	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	POC1B-GALNT4	F8VUJ3	575 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ANKRD28	O15084	1053 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TMPRSS2	O15393	492 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	GSTA1	P08263	222 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SNRPA	P09012	282 aa	Known RBP	16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CDH2	P19022	906 aa	Predicted RBP	16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	OR2B6	P58173	313 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	C2orf54	Q08AI8	447 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SKP2	Q13309	424 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PDE7A	Q13946	482 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	PDZK1	Q5T2W1	519 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ANKRD16	Q6P6B7	361 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SHISA2	Q6UWI4	295 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	LCA5	Q86VQ0	697 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DCAKD	Q8WVC6	231 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ARL5B	Q96KC2	179 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	DOK1	Q99704	481 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CCT7	Q99832	543 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	ZNF747	Q9BV97	191 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	GSTO2	Q9H4Y5	243 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	SIRT3	Q9NTG7	399 aa	Predicted RBP	16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	C1orf109	Q9NX04	203 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	CHRNA9	Q9UGM1	479 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	USP22	Q9UPT9	525 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	TRAPPC4	Q9Y296	219 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	KCNE3	Q9Y6H6	103 aa		16.71	■□□□□ 0.27
CDK5RAP2-218	ENST00000491334	hCG_2039718	K7EN88	272 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	EIF1B	O60739	113 aa	Known RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	CSTA	P01040	98 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	EFNA1	P20827	205 aa	Predicted RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	PRPH2	P23942	346 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	CCT3	P49368	545 aa	Known RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	ARFIP2	P53365	341 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	H3F3A	P84243	136 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	PDCD2	Q16342	344 aa	Predicted RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	HIKESHI	Q53FT3	197 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	R3HCC1L	Q7Z5L2	792 aa	Known RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	ZCCHC24	Q8N2G6	241 aa	Known RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	SVOPL	Q8N434	492 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	POMGNT2	Q8NAT1	580 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	OR56A1	Q8NGH5	318 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	MTERF3	Q96E29	417 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	TSSK3	Q96PN8	268 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	NAA11	Q9BSU3	229 aa	Predicted RBP	16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	NMUR2	Q9GZQ4	415 aa		16.7	■□□□□ 0.26
CDK5RAP2-218	ENST00000491334	CTPS2	Q9NRF8	586 aa		16.7	■□□□□ 0.26

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms