RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 PNNQ9H307 717 aaKnown RBP3.3□□□□□ -1.88
XRN1-213ENST00000489241 ZNF385DQ9H6B1 395 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 AZI2Q9H6S1 392 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 NUDT15Q9NV35 164 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 PPIAL4AQ9Y536 164 aa3.3□□□□□ -1.88
XRN1-213ENST00000489241 CACNA1FO60840 1977 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 TRDCB7Z8K6 153 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 E7ESA3 106 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 KIF2AO00139 706 aaPredicted RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 DNALI1O14645 258 aaPredicted RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 GAPDHP04406 335 aaKnown RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 CAPN2P17655 700 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 YWHABP31946 246 aaKnown RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 RDXP35241 583 aaKnown RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 LEPP41159 167 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 MAGEA9P43362 315 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CRYBB1P53674 252 aaPredicted RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 PRRX1P54821 245 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CXCL6P80162 114 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 ENPEPQ07075 957 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 SERTAD2Q14140 314 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 RCN1Q15293 331 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 KLHL38Q2WGJ6 581 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 BCL7AQ4VC05 210 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 PRAMEF20Q5VT98 475 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CCDC137Q6PK04 289 aaKnown RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 GPR65Q8IYL9 337 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 SVOPLQ8N434 492 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 POM121L12Q8N7R1 296 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 SDR9C7Q8NEX9 313 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 OR1L6Q8NGR2 347 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 TCTEX1D2Q8WW35 142 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 NOL4LQ96MY1 436 aaPredicted RBP3.29□□□□□ -1.88
XRN1-213ENST00000489241 TBX15Q96SF7 602 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 NUP58Q9BVL2 599 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 RAB34Q9BZG1 259 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 NANSQ9NR45 359 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CUTCQ9NTM9 273 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 RAB20Q9NX57 234 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 DPM3Q9P2X0 92 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 SLC7A8Q9UHI5 535 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 PHF11Q9UIL8 331 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CSAG2Q9Y5P2 127 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 SMAD5-AS1Q9Y6J3 95 aa3.29□□□□□ -1.88
XRN1-213ENST00000489241 CLSPNQ9HAW4 1339 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 PPIAL4EA0A075B759 164 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 IGHV3-35A0A0C4DH35 117 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 HEATR9A2RTY3 570 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 HCN1O60741 890 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 PABPC4LP0CB38 370 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 PPIAL4FP0DN26 164 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 PGAM2P15259 253 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 COX5AP20674 150 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 EPHX2P34913 555 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 PTGDSP41222 190 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 SSR1P43307 286 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 RPL34P49207 117 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 HNRNPA3P51991 378 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 RPL32P62910 135 aaKnown RBP3.28□□□□□ -1.88
XRN1-213ENST00000489241 GRB7Q14451 532 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 QRICH1Q2TAL8 776 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 SLC22A10Q63ZE4 541 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 ENPP6Q6UWR7 440 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 PAQR7Q86WK9 346 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 OR2L3Q8NG85 312 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 OR52H1Q8NGJ2 320 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 OR56B4Q8NH76 319 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 KCNG3Q8TAE7 436 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 CLCC1Q96S66 551 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 RNF2Q99496 336 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 FMO2Q99518 471 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 SLITRK2Q9H156 845 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 ANKRD19PQ9H560 264 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.28□□□□□ -1.88
XRN1-213ENST00000489241 SLC2A8Q9NY64 477 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 CA5BQ9Y2D0 317 aa3.28□□□□□ -1.88
XRN1-213ENST00000489241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.27□□□□□ -1.89
XRN1-213ENST00000489241 A0A1W2PPV9 198 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 IDSB3KWA1 339 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 GOLGA8SH3BPF8 625 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 ABCD4O14678 606 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 GPAA1O43292 621 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 ZNF254O75437 659 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 CST1P01037 141 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 LGALS2P05162 132 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 CRYGBP07316 175 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 RNH1P13489 461 aaKnown RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 GALP22466 123 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 CD1CP29017 333 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 CASP14P31944 242 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 LMO4P61968 165 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 TGM3Q08188 693 aa3.27□□□□□ -1.89
XRN1-213ENST00000489241 BST2Q10589 180 aaKnown RBP3.27□□□□□ -1.89
XRN1-213ENST00000489241 ASAH1Q13510 395 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms