RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NOVA1P51513 510 aaKnown RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 RND3P61587 244 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 RPL23AP62750 156 aaKnown RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 EWSR1Q01844 656 aaKnown RBP eCLIP2.25□□□□□ -2.05
RFC4-213ENST00000489028 RIPPLY1Q0D2K3 151 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 C10orf120Q5SQS8 335 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 ACSM5Q6NUN0 579 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 FAM71F2Q6NXP2 309 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 RUFY3Q7L099 469 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 NLRP9Q7RTR0 991 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 APTXQ7Z2E3 356 aaKnown RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 NANOGNBQ7Z5D8 188 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 MOB3BQ86TA1 216 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PPP1R27Q86WC6 154 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 SERPINA9Q86WD7 417 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 C17orf82Q86X59 251 aaPredicted RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 NBPF5PQ86XG9 351 aaPredicted RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 CCDC50Q8IVM0 306 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 LRRC75A-AS1Q8N1F1 130 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 C15orf54Q8N8G6 183 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 OR2A12Q8NGT7 310 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 CNIH3Q8TBE1 160 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 AENQ8WTP8 325 aaKnown RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 FAM3CQ92520 227 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 NEIL2Q969S2 332 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 COQ2Q96H96 371 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 CNDP1Q96KN2 507 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 RPRD1AQ96P16 312 aaPredicted RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 TGM7Q96PF1 710 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 TMEM121Q9BTD3 319 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 TMEM43Q9BTV4 400 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 EDEM2Q9BV94 578 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PKIBQ9C010 78 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 UFSP2Q9NUQ7 469 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 NMRK1Q9NWW6 199 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 MARCH5Q9NX47 278 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 OR1A1Q9P1Q5 309 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PCSK1NQ9UHG2 260 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 KLK12Q9UKR0 248 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 CDH9Q9ULB4 789 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 PRG3Q9Y2Y8 225 aaPredicted RBP2.25□□□□□ -2.05
RFC4-213ENST00000489028 PPIAL4AQ9Y536 164 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 ALG6Q9Y672 507 aa2.25□□□□□ -2.05
RFC4-213ENST00000489028 TRAV26-1A0A087WT03 109 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 A0A0U1RQS6 177 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 ESYT2A0FGR8 921 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 XKRY2A2RUG3 117 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 USP27XA6NNY8 438 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 MSH4O15457 936 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 TBL1XO60907 577 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 CA11O75493 328 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 OR8U8P0C7N1 319 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 IGLL1P15814 213 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 NCF2P19878 526 aaPredicted RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 LAP3P28838 519 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 ADORA2BP29275 332 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 HPCAL1P37235 193 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 RPL8P62917 257 aaKnown RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 VLDLRP98155 873 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 TLE4Q04727 773 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 AANATQ16613 207 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 METTL11BQ5VVY1 283 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 ZSCAN25Q6NSZ9 544 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 FAHD2BQ6P2I3 314 aaPredicted RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 KCNIP4Q6PIL6 250 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 CYS1Q717R9 158 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 CCDC80Q76M96 950 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 ZNF589Q86UQ0 364 aaPredicted RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 VSTM4Q8IW00 320 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 DHRSXQ8N5I4 330 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 OR2T33Q8NG76 320 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 OR56B2PQ8NGI1 322 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 C7orf33Q8WU49 177 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 PIGCQ92535 297 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 RPL3LQ92901 407 aaKnown RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 FBXO32Q969P5 355 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 FAHD2AQ96GK7 314 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 C12orf66Q96MD2 445 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 AMDHD1Q96NU7 426 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 NPAS2Q99743 824 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 SLC6A7Q99884 636 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 NXF5Q9H1B4 397 aaKnown RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 NANOGQ9H9S0 305 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 CAB39LQ9H9S4 337 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 FN3KRPQ9HA64 309 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 HYPKQ9NX55 129 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 LCMT1Q9UIC8 334 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 PTBP2Q9UKA9 531 aaKnown RBP2.24□□□□□ -2.05
RFC4-213ENST00000489028 OARD1Q9Y530 152 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 LTBP1Q14766 1721 aa2.24□□□□□ -2.05
RFC4-213ENST00000489028 FRMPD4Q14CM0 1322 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 FAM47DPA6NHR8 397 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 TRAF3IP2O43734 574 aaPredicted RBP2.23□□□□□ -2.05
RFC4-213ENST00000489028 UGT2B17O75795 530 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 CIB2O75838 187 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 CAPN1P07384 714 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 PNMTP11086 282 aa2.23□□□□□ -2.05
RFC4-213ENST00000489028 BDKRB1P46663 353 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms