RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 OR52N5Q8NH56 324 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 ZNF563Q8TA94 476 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 PIGXQ8TBF5 258 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 PPP1R36Q96LQ0 422 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 REPIN1Q9BWE0 567 aaKnown RBP16.23■□□□□ 0.19
HDAC6-231ENST00000488905 TAS2R16Q9NYV7 291 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 MALT1Q9UDY8 824 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 PCDHGB4Q9UN71 923 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 MGAT4BQ9UQ53 548 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 B3GALT5Q9Y2C3 310 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 HDGFL3Q9Y3E1 203 aa16.23■□□□□ 0.19
HDAC6-231ENST00000488905 CIB4A0PJX0 185 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 DNPH1O43598 174 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 SCN2BO60939 215 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 PTNP21246 168 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 UQCRC2P22695 453 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 RYKP34925 604 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 KHKP50053 298 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 NUDT6P53370 316 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 PLAURQ03405 335 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 C11orf71Q6IPW1 123 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 XAGE5Q8WWM1 108 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 RAB8BQ92930 207 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ROPN1LQ96C74 230 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 DNAJA3Q96EY1 480 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ARL5BQ96KC2 179 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
HDAC6-231ENST00000488905 CACNG6Q9BXT2 260 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ROPN1BQ9BZX4 212 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-231ENST00000488905 DPY30Q9C005 99 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 SAP130Q9H0E3 1048 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 AKTIPQ9H8T0 292 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ROPN1Q9HAT0 212 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-231ENST00000488905 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
HDAC6-231ENST00000488905 YAE1D1Q9NRH1 226 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 ASB6Q9NWX5 421 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 POU2F3Q9UKI9 436 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 SLC25A15Q9Y619 301 aa16.22■□□□□ 0.19
HDAC6-231ENST00000488905 IGHV4-30-2A0A087WSY4 118 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 CCT8L1PA6NM43 557 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 E7EQL1 145 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 GPR171O14626 319 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 ITM2AO43736 263 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 SSX4O60224 188 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 DHRS4L1P0CG22 281 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 PTAFRP25105 342 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 TTKP33981 857 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 ZNF83P51522 516 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 SLC16A1P53985 500 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 VSNL1P62760 191 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 IRX1P78414 480 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-231ENST00000488905 HPCAP84074 193 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 SAXO2Q658L1 398 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 SLC22A25Q6T423 547 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 KLHL17Q6TDP4 642 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 NUDCD3Q8IVD9 361 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 ZNF781Q8N8C0 355 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 TESCQ96BS2 214 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 DHRS9Q9BPW9 319 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 RHNO1Q9BSD3 238 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 OR11A1Q9GZK7 315 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 CBLN4Q9NTU7 201 aa16.21■□□□□ 0.19
HDAC6-231ENST00000488905 A0A096LNT2 108 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 PRSS51A0A1B0GVH4 220 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 A0A1W2PR80 420 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 CPSF4O95639 269 aaKnown RBP16.2■□□□□ 0.18
HDAC6-231ENST00000488905 CD40P25942 277 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 FKBP2P26885 142 aaKnown RBP16.2■□□□□ 0.18
HDAC6-231ENST00000488905 NTF4P34130 210 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 CLK1P49759 484 aaKnown RBP16.2■□□□□ 0.18
HDAC6-231ENST00000488905 CHRNEQ04844 493 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 ANXA8L1Q5VT79 327 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 AP1ARQ63HQ0 302 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 HMBOX1Q6NT76 420 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 B3GLCTQ6Y288 498 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 HMGN2P46Q86SG4 172 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 HIPK1Q86Z02 1210 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 ARFGAP2Q8N6H7 521 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 VPS37AQ8NEZ2 397 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 NEURL3Q96EH8 262 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 ANK2Q01484 3957 aa16.2■□□□□ 0.18
HDAC6-231ENST00000488905 MALRD1Q5VYJ5 2156 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CLDN24A6NM45 220 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 MRPL33O75394 65 aaKnown RBP16.19■□□□□ 0.18
HDAC6-231ENST00000488905 SERPINE1P05121 402 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 ITGA5P08648 1049 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CHI3L1P36222 383 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-231ENST00000488905 MAGEA8P43361 318 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 FOXG1P55316 489 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-231ENST00000488905 PHC1P78364 1004 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 KCNJ10P78508 379 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CASP8Q14790 479 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CHI3L2Q15782 390 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 GABRA6Q16445 453 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 DPY19L1Q2PZI1 675 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 GPAT3Q53EU6 434 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 SPANXN4Q5MJ08 99 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 OR7E24Q6IFN5 339 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CLEC2AQ6UVW9 174 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms