RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CASP3P42574 277 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 GPR85P60893 370 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 KLRB1Q12918 225 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 EFR3AQ14156 821 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 SPCS2Q15005 226 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 ATAD3BQ5T9A4 648 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 TEX19Q8NA77 164 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 GRHL3Q8TE85 626 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 RNF138Q8WVD3 245 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 SECISBP2Q96T21 854 aaKnown RBP17.65■□□□□ 0.42
CCM2-216ENST00000488727 FUZQ9BT04 418 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 COPS4Q9BT78 406 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 G6PC3Q9BUM1 346 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 ZNF350Q9GZX5 532 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 SACM1LQ9NTJ5 587 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 KALRNO60229 2985 aa17.65■□□□□ 0.42
CCM2-216ENST00000488727 TRBV4-1A0A0J9YWV2 114 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CLCA1A8K7I4 914 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 SEMA7AO75326 666 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CLPXO76031 633 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 UTS2O95399 124 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 GASTP01350 101 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CDK1P06493 297 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 H1F0P07305 194 aaKnown RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 FUT4P22083 530 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 PTGDSP41222 190 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CRISP1P54107 249 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 ZNF829Q3KNS6 432 aaPredicted RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 LINC00299Q6ZSB3 139 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 SULF2Q8IWU5 870 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 TMEM178AQ8NBL3 297 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 OR4C3Q8NH37 302 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 SLC39A7Q92504 469 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 BORCS5Q969J3 196 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 TMCO6Q96DC7 493 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CNIH4Q9P003 139 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 RHCGQ9UBD6 479 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 SPTA1P02549 2419 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 NPIPA5A0A0B4J1W7 369 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 PINLYPA6NC86 204 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 NPIPA7E9PJI5 369 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 ADAM10O14672 748 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 FADS1O60427 444 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 P04436 131 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CHRM4P08173 479 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 NPIPA8P0DM63 369 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 CDC42P60953 191 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 PTGES3Q15185 160 aaKnown RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 GPAT3Q53EU6 434 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 DCST1Q5T197 706 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 TMEM81Q6P7N7 255 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 P2RY8Q86VZ1 359 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 OR4D11Q8NGI4 311 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 GGHQ92820 318 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 GTPBP3Q969Y2 492 aaKnown RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 NTNG2Q96CW9 530 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 TRNT1Q96Q11 434 aaKnown RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 RTN4RQ9BZR6 473 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 METTL7AQ9H8H3 244 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 GALNT9Q9HCQ5 603 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 IMPAD1Q9NX62 359 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 MKLN1Q9UL63 735 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 LIPT1Q9Y234 373 aa17.64■□□□□ 0.41
CCM2-216ENST00000488727 KLF13Q9Y2Y9 288 aaPredicted RBP17.64■□□□□ 0.41
CCM2-216ENST00000488727 A0A0G2JPF8 293 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 SH3D21A4FU49 640 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 CLDN24A6NM45 220 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 HNRNPCL2B2RXH8 293 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 HNRNPCL3B7ZW38 293 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 STX11O75558 287 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 HNRNPCL4P0DMR1 293 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 CNR1P21554 472 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 CHMP24386 653 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 PSMB9P28065 219 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 EVI2BP34910 448 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 GSSP48637 474 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 IDH2P48735 452 aaKnown RBP17.63■□□□□ 0.41
CCM2-216ENST00000488727 DNASE1L1P49184 302 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 TYW3Q6IPR3 259 aaKnown RBP17.63■□□□□ 0.41
CCM2-216ENST00000488727 APOOLQ6UXV4 268 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 FRRS1Q6ZNA5 592 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 ANGPTL4Q9BY76 406 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 UCK2Q9BZX2 261 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 SLC38A1Q9H2H9 487 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 KCNE5Q9UJ90 142 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 A4GNTQ9UNA3 340 aa17.63■□□□□ 0.41
CCM2-216ENST00000488727 SMG1Q96Q15 3661 aaKnown RBP17.63■□□□□ 0.41
CCM2-216ENST00000488727 CENPVL1A0A0U1RR11 272 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 NPIPB9F8W1W9 429 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 OSMP13725 252 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 PMP22Q01453 160 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 GPR68Q15743 365 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 FLYWCH1Q4VC44 716 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 DEF8Q6ZN54 512 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.62■□□□□ 0.41
CCM2-216ENST00000488727 LINC00471Q8N535 108 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 POGLUT1Q8NBL1 392 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 OR2M7Q8NG81 312 aa17.62■□□□□ 0.41
CCM2-216ENST00000488727 SAP130Q9H0E3 1048 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms