RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PFN4Q8NHR9 129 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 M1APQ8TC57 530 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 SLC22A8Q8TCC7 542 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 CT55Q8WUE5 264 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 TMCO6Q96DC7 493 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 DEFB126Q9BYW3 111 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 LIN28AQ9H9Z2 209 aaKnown RBP11.61□□□□□ -0.55
NELFE-209ENST00000488426 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 CDH10Q9Y6N8 788 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 HEATR5AQ86XA9 2040 aa11.61□□□□□ -0.55
NELFE-209ENST00000488426 A0A087WUJ7 227 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 UNC119BA6NIH7 251 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 WWP2O00308 870 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 TERTO14746 1132 aaKnown RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 OIP5O43482 229 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 XPNPEP2O43895 674 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 PNMTP11086 282 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 TCN2P20062 427 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 ZNF117Q03924 483 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 C19orf57Q0VDD7 668 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 SMN1Q16637 294 aaKnown RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 TMEM201Q5SNT2 666 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 FAM69BQ5VUD6 431 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 DESI1Q6ICB0 168 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 CBLN3Q6UW01 205 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 NUP54Q7Z3B4 507 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 MARCH3Q86UD3 253 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 OR8J1Q8NGP2 316 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 THAP3Q8WTV1 239 aaPredicted RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 RNF138Q8WVD3 245 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 NACC2Q96BF6 587 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 C3orf49Q96BT1 292 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 WBP1Q96G27 269 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 Q96MT0 163 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 NODALQ96S42 347 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 POLDIP3Q9BY77 421 aaKnown RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 SLC19A3Q9BZV2 496 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 DSN1Q9H410 356 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 EGLN3Q9H6Z9 239 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 GPN2Q9H9Y4 310 aaPredicted RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 ZBTB20Q9HC78 741 aaPredicted RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 MEPEQ9NQ76 525 aaPredicted RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 TBC1D23Q9NUY8 699 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
NELFE-209ENST00000488426 CLN6Q9NWW5 311 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 AASSQ9UDR5 926 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 TCFL5Q9UL49 500 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 SNX5Q9Y5X3 404 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 TENM4Q6N022 2769 aa11.6□□□□□ -0.55
NELFE-209ENST00000488426 PTGES3LE9PB15 166 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 SOCS6O14544 535 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 CDC42EP2O14613 210 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 HCRTR2O43614 444 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 IGF2P01344 180 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 HTR1AP08908 422 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 CCR4P51679 360 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 BORAQ6PGQ7 559 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 NDUFAF7Q7L592 441 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 SPARTQ8N0X7 666 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 ZNF540Q8NDQ6 660 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 OR11G2Q8NGC1 345 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 OR8D4Q8NGM9 314 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 HGDQ93099 445 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 PLA2G12AQ9BZM1 189 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 C20orf141Q9NUB4 165 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 ICAM5Q9UMF0 924 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 FBXO45P0C2W1 286 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 PGCP20142 388 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 MAKP20794 623 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 TTKP33981 857 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 PCYT1AP49585 367 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 SSPNQ14714 243 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 SLC25A30Q5SVS4 291 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 C16orf47Q6ZP98 133 aaPredicted RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 IQCF1Q8N6M8 205 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 AMER2Q8N7J2 671 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 OR5W2Q8NH69 310 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 SLC38A2Q96QD8 506 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 TUBA1CQ9BQE3 449 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 TMEM43Q9BTV4 400 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 RTN4RQ9BZR6 473 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 ATP13A2Q9NQ11 1180 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 PSORS1C1Q9UIG5 152 aa11.59□□□□□ -0.55
NELFE-209ENST00000488426 FARSAQ9Y285 508 aaKnown RBP11.59□□□□□ -0.55
NELFE-209ENST00000488426 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms