RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 GRINAQ7Z429 371 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 FAM71CQ8NEG0 241 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 AENQ8WTP8 325 aaKnown RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 APH1AQ96BI3 265 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 TESCQ96BS2 214 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 ZHX1-C8orf76Q96EF9 292 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 ARL5BQ96KC2 179 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 PKNOX2Q96KN3 472 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 HS6ST2Q96MM7 605 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 MUS81Q96NY9 551 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 C20orf27Q9GZN8 174 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 BARX1Q9HBU1 254 aaPredicted RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 NPAP1Q9NZP6 1156 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 CHRNA9Q9UGM1 479 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 GDF2Q9UK05 429 aaPredicted RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 B3GALT5Q9Y2C3 310 aa13.51□□□□□ -0.25
TRIM50-203ENST00000488217 FBN1P35555 2871 aaKnown RBP13.51□□□□□ -0.25
TRIM50-203ENST00000488217 GOLGA8QA0A0J9YX86 632 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 PRAMEF27A3QJZ7 478 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 GOLGA8OA6NCC3 632 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 CCT8L1PA6NM43 557 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 GOLGA8NF8WBI6 632 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 KIAA0513O60268 411 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 ADAM11O75078 769 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 BCAS1O75363 584 aaPredicted RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 MRPL33O75394 65 aaKnown RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 SNUPNO95149 360 aaKnown RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 PTNP21246 168 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 PTAFRP25105 342 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 CHI3L1P36222 383 aaPredicted RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 HTR3AP46098 478 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 SLC1A6P48664 564 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 IDH2P48735 452 aaKnown RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 DMTNQ08495 405 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 GPAT3Q53EU6 434 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 TMEM108Q6UXF1 575 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 CCDC103Q8IW40 242 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 ARFGAP2Q8N6H7 521 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 SPATA3Q8NHX4 192 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 NEURL3Q96EH8 262 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 EXOSC3Q9NQT5 275 aaKnown RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 ASB6Q9NWX5 421 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 TMEM181Q9P2C4 612 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 MARCOQ9UEW3 520 aaPredicted RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 MGAT4BQ9UQ53 548 aa13.5□□□□□ -0.25
TRIM50-203ENST00000488217 RAI1Q7Z5J4 1906 aaPredicted RBP13.5□□□□□ -0.25
TRIM50-203ENST00000488217 E7EQL1 145 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 DNPH1O43598 174 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 TLX2O43763 284 aaPredicted RBP13.49□□□□□ -0.25
TRIM50-203ENST00000488217 SSX4O60224 188 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 LBPP18428 481 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 CCNA2P20248 432 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 S100A3P33764 101 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 TTKP33981 857 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 MAGEA8P43361 318 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 SLC16A1P53985 500 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 CDH11P55287 796 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 OR2B6P58173 313 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 H3F3AP84243 136 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 ABLIM2Q6H8Q1 611 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 OR7E24Q6IFN5 339 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 KLHL17Q6TDP4 642 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 FRRS1Q6ZNA5 592 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 HMGN2P46Q86SG4 172 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 LRRC34Q8IZ02 419 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 DEPDC4Q8N2C3 294 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
TRIM50-203ENST00000488217 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 PIGXQ8TBF5 258 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 CNOT9Q92600 299 aaKnown RBP13.49□□□□□ -0.25
TRIM50-203ENST00000488217 PMM1Q92871 262 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 ADAD1Q96M93 576 aaKnown RBP13.49□□□□□ -0.25
TRIM50-203ENST00000488217 DHRS9Q9BPW9 319 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 SLC35A5Q9BS91 424 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 RHNO1Q9BSD3 238 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 PARPBPQ9NWS1 579 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 SLC25A15Q9Y619 301 aa13.49□□□□□ -0.25
TRIM50-203ENST00000488217 TMED7-TICAM2A0A0A6YYA0 188 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 CCDC154A6NI56 674 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 CLDN24A6NM45 220 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 HMGN4O00479 90 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 RGS16O15492 202 aaPredicted RBP13.48□□□□□ -0.25
TRIM50-203ENST00000488217 CD5LO43866 347 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 EIF1BO60739 113 aaKnown RBP13.48□□□□□ -0.25
TRIM50-203ENST00000488217 RAD51DO75771 328 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 CD40P25942 277 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 KHKP50053 298 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 ZNF83P51522 516 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 MAP2K6P52564 334 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 CLNS1AP54105 237 aaKnown RBP13.48□□□□□ -0.25
TRIM50-203ENST00000488217 SLC35A1P78382 337 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 FUT5Q11128 374 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 STX3Q13277 289 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 GABRA6Q16445 453 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 DPY19L1Q2PZI1 675 aa13.48□□□□□ -0.25
TRIM50-203ENST00000488217 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms