RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, human

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39B-208	ENST00000487305	SLC6A19	Q695T7	634 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	THSD4	Q6ZMP0	1018 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	DPY19L2P2	Q6ZN68	376 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	IDO2	Q6ZQW0	420 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ZNF680	Q8NEM1	530 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	RAB40A	Q8WXH6	277 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	THRSP	Q92748	146 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CITED4	Q96RK1	184 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ZFYVE21	Q9BQ24	234 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LMF2	Q9BU23	707 aa	Known RBP	11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	BRD7	Q9NPI1	651 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ACTR10	Q9NZ32	417 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CHRNA9	Q9UGM1	479 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SLC23A1	Q9UHI7	598 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	NUP50	Q9UKX7	468 aa		11.44	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LINC01553	A4QN01	128 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	EFCAB7	A8K855	629 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	GABARAP	H6UMI1	98 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	BTN3A3	O00478	584 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	GIF	P27352	417 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MAPK3	P27361	379 aa	Predicted RBP	11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	DIO1	P49895	249 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CCR9	P51686	369 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	OR10A3	P58181	314 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SKP1	P63208	163 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	NFATC4	Q14934	902 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	FIGLA	Q6QHK4	219 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	UBE2Q1	Q7Z7E8	422 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SFTPA1	Q8IWL2	248 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ZNF440	Q8IYI8	595 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	OR6V1	Q8N148	313 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	C17orf47	Q8NEP4	570 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	OR11H7	Q8NGC8	314 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	OR14C36	Q8NHC7	312 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	FLVCR1-AS1	Q8TAF5	88 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ZNF671	Q8TAW3	534 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	RPS4Y2	Q8TD47	263 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SNX33	Q8WV41	574 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	NSMAF	Q92636	917 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ERMAP	Q96PL5	475 aa	Predicted RBP	11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	DHRS9	Q9BPW9	319 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MEPE	Q9NQ76	525 aa	Predicted RBP	11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	NANS	Q9NR45	359 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	DZANK1	Q9NVP4	752 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MAT2B	Q9NZL9	334 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	PLEKHM1	Q9Y4G2	1056 aa		11.43	□□□□□ -0.58
TMEM39B-208	ENST00000487305	BRCA2	P51587	3418 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305		A0A1B0GUH1	482 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305		A0A1B0GWA3	101 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305		B8ZZF3	427 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	GPR171	O14626	319 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	KHNYN	O15037	678 aa	Known RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LAT	O43561	262 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	PPP1R3D	O95685	299 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	TACSTD2	P09758	323 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	GKN3P	P0CG01	181 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CALCB	P10092	127 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ATF1	P18846	271 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	FCAR	P24071	287 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	GABRA3	P34903	492 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	RAB14	P61106	215 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MADCAM1	Q13477	382 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SLC25A35	Q3KQZ1	300 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	C2orf27A	Q580R0	203 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CEP78	Q5JTW2	689 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CLLU1	Q5K131	121 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ABI3BP	Q7Z7G0	1075 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	NXPE2	Q96DL1	559 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	PELI1	Q96FA3	418 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LCOR	Q96JN0	433 aa	Predicted RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MNT	Q99583	582 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	G6PC3	Q9BUM1	346 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ENKD1	Q9H0I2	346 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SLITRK2	Q9H156	845 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MCCC2	Q9HCC0	563 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	FGF22	Q9HCT0	170 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	WDR70	Q9NW82	654 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	RPS6KB2	Q9UBS0	482 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	TBC1D29	Q9UFV1	150 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SERGEF	Q9UGK8	458 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	FBXL3	Q9UKT7	428 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ETV7	Q9Y603	341 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	SNRNP200	O75643	2136 aa	Known RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	TRAV6	A0A075B6T7	132 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	TBC1D3I	A0A087WXS9	549 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LRRC72	A6NJI9	287 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	HSPB2	A8KAH6	182 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	LEUTX	A8MZ59	168 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	AIP	O00170	330 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CYR61	O00622	381 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ZNF432	O94892	652 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	APEH	P13798	732 aa	Known RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	CPN1	P15169	458 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	IL9	P15248	144 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	MAT2A	P31153	395 aa	Known RBP	11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	ACVR1B	P36896	505 aa		11.42	□□□□□ -0.58
TMEM39B-208	ENST00000487305	PRPS1	P60891	318 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms