RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 PPP1R8Q12972 351 aaKnown RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 INAQ16352 499 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ALG10BQ5I7T1 473 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 HMBOX1Q6NT76 420 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ZFP1Q6P2D0 407 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ULK3Q6PHR2 472 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 POMZP3Q6PJE2 187 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 LINC00114Q6XXX2 140 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 GRINAQ7Z429 371 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 CYP4Z1Q86W10 505 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 NKAIN4Q8IVV8 208 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 LILRA2Q8N149 483 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 GTPBP8Q8N3Z3 284 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 RNF217Q8TC41 542 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 SLC38A4Q969I6 547 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 MRGPRX4Q96LA9 322 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 PKP2Q99959 881 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 FNDC11Q9BVV2 318 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 POLR2J2Q9GZM3 115 aaKnown RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 POLR2J3Q9H1A7 115 aaKnown RBP11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ACKR4Q9NPB9 350 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 QPCTLQ9NXS2 382 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 PRDM4Q9UKN5 801 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 NPIPA1Q9UND3 350 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 SLC6A5Q9Y345 797 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 TMED7Q9Y3B3 224 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF337Q9Y3M9 751 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 NCKAP5O14513 1909 aa11.54□□□□□ -0.56
HDAC6-229ENST00000486665 ABCA12Q86UK0 2595 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 TEP1Q99973 2627 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 TMEM72A0PK05 275 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 TFECO14948 347 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 CLOCKO15516 846 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 HNRNPRO43390 633 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 CST1P01037 141 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 OPN1LWP04000 364 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 H1F0P07305 194 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 HOXB6P17509 224 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 PTNP21246 168 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 ADH6P28332 368 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 RRM2P31350 389 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 APOBEC1P41238 236 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 EIF1P41567 113 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 IST1P53990 364 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 GFRA1P56159 465 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 SPIBQ01892 262 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 RAET1LQ5VY80 246 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 OR2T5Q6IEZ7 315 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 AAGABQ6PD74 315 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 TMEM179BQ7Z7N9 219 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 AMIGO2Q86SJ2 522 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 P3H2Q8IVL5 708 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 OFCC1Q8IZS5 231 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 ATP6V1C2Q8NEY4 427 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 OR2T29Q8NH02 315 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 OR52J3Q8NH60 311 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 DNAJA4Q8WW22 397 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 RELTQ969Z4 430 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 SNRNP40Q96DI7 357 aaKnown RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 FUZQ9BT04 418 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 YY1AP1Q9H869 796 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 NTN4Q9HB63 628 aa11.53□□□□□ -0.56
HDAC6-229ENST00000486665 ERRFI1Q9UJM3 462 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-229ENST00000486665 IGKV1D-42A0A075B6H8 117 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 A0A087WUJ7 227 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 TRBV4-1A0A0J9YWV2 114 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ELOA3DA6NLF2 546 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-229ENST00000486665 H0Y3Z8 333 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 CHP2O43745 196 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SUSD5O60279 629 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 BAG2O95816 211 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 IGHG3P01860 377 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 CRYABP02511 175 aaKnown RBP11.52□□□□□ -0.57
HDAC6-229ENST00000486665 THRBP10828 461 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ZNF17P17021 662 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 CXCR1P25024 350 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 FASP25445 335 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SHC1P29353 583 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 HTR3AP46098 478 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 LIMS1P48059 325 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 STARP49675 285 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 HMGA2P52926 109 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 TRAM2Q15035 370 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 SEC23BQ15437 767 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ATP6AP1Q15904 470 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ELOA3BQ3SY89 546 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 PODNL1Q6PEZ8 512 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 TBPL2Q6SJ96 375 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 TRILQ7L0X0 811 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 ELOA3Q8NG57 546 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 OR4C15Q8NGM1 316 aa11.52□□□□□ -0.57
HDAC6-229ENST00000486665 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms