RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 TRMT10CQ7L0Y3 403 aaKnown RBP12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 R3HCC1LQ7Z5L2 792 aaKnown RBP12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 C10orf107Q8IVU9 208 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 CLEC4FQ8N1N0 589 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 ZIC4Q8N9L1 334 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 OR56A1Q8NGH5 318 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 BOD1Q96IK1 185 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 C3orf30Q96M34 536 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 OR11A1Q9GZK7 315 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 EMC3Q9P0I2 261 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 PSMC3IPQ9P2W1 217 aaPredicted RBP12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 MKLN1Q9UL63 735 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 FIS1Q9Y3D6 152 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 PMF1-BGLAPU3KQ54 211 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 DYSFO75923 2080 aa12.45□□□□□ -0.42
SDCCAG3-211ENST00000486441 NDUFS8O00217 210 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 MRPL33O75394 65 aaKnown RBP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 CHRNGP07510 517 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 IGFBP1P08833 259 aaPredicted RBP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 UBTFL6P0CB48 400 aaPredicted RBP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 NEFHP12036 1026 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 ARRB2P32121 409 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 PDLIM4P50479 330 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 HBA1P69905 142 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 CHRNB3Q05901 458 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 GPR68Q15743 365 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 WHAMMP3Q1A5X7 153 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 CR1LQ2VPA4 569 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 CCDC153Q494R4 210 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 XKR7Q5GH72 579 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 DEPDC4Q8N2C3 294 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 TMCO5AQ8N6Q1 288 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 OR5AK3PQ8NH89 298 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 SFXN5Q8TD22 340 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 ZNF350Q9GZX5 532 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 FAF1Q9UNN5 650 aaPredicted RBP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
SDCCAG3-211ENST00000486441 PRAMEF27A3QJZ7 478 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 GPR171O14626 319 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 CYP7B1O75881 506 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 SLU7O95391 586 aaKnown RBP12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 TGFAP01135 160 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 C1QCP02747 245 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 IMPDH2P12268 514 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 APEHP13798 732 aaKnown RBP12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 ZNF23P17027 643 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 PGCP20142 388 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 IL2RGP31785 369 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 APOBEC1P41238 236 aaKnown RBP12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 RUNX1T1Q06455 604 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 FUT5Q11128 374 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 PCLAFQ15004 111 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 ARHGAP11BQ3KRB8 267 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 C6orf136Q5SQH8 315 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 EMBQ6PCB8 327 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 C6orf120Q7Z4R8 191 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 SLC25A43Q8WUT9 341 aaPredicted RBP12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 TWIST2Q8WVJ9 160 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 SAP130Q9H0E3 1048 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 SERINC1Q9NRX5 453 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 CHRNA9Q9UGM1 479 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 HDGFL3Q9Y3E1 203 aa12.43□□□□□ -0.42
SDCCAG3-211ENST00000486441 CMYA5Q8N3K9 4069 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 CLDN24A6NM45 220 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 DNPH1O43598 174 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 SCN2BO60939 215 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 LILRA1O75019 489 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 PEX11AO75192 247 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 CSTAP01040 98 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 KRT16P08779 473 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 SLC17A1Q14916 467 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 TYW3Q6IPR3 259 aaKnown RBP12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 C17orf78Q8N4C9 275 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 PIGXQ8TBF5 258 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 TMEM234Q8WY98 164 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 PIMREGQ9BSJ6 248 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 BPESC1Q9GZL8 116 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 FKRPQ9H9S5 495 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
SDCCAG3-211ENST00000486441 LRP5LA4QPB2 252 aa12.41□□□□□ -0.42
SDCCAG3-211ENST00000486441 KLF11O14901 512 aa12.41□□□□□ -0.42
SDCCAG3-211ENST00000486441 KIAA0513O60268 411 aa12.41□□□□□ -0.42
SDCCAG3-211ENST00000486441 STX11O75558 287 aa12.41□□□□□ -0.42
SDCCAG3-211ENST00000486441 SHBGP04278 402 aa12.41□□□□□ -0.42
SDCCAG3-211ENST00000486441 GUSBP08236 651 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms