RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 IGSF21Q96ID5 467 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SFXN2Q96NB2 322 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 LRFN5Q96NI6 719 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 PELOQ9BRX2 385 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 MRI1Q9BV20 369 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 ZDHHC5Q9C0B5 715 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC6A17Q9H1V8 727 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 OR52A5Q9H2C5 316 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 UBQLN3Q9H347 655 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 METTL17Q9H7H0 456 aaPredicted RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 ISG20L2Q9H9L3 353 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC35C2Q9NQQ7 365 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 CMC2Q9NRP2 79 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 KLHL28Q9NXS3 571 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SAGE1Q9NXZ1 904 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 RDH8Q9NYR8 311 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 TAS2R5Q9NYW4 299 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 NLGN3Q9NZ94 848 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 HCN3Q9P1Z3 774 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 MGAT4CQ9UBM8 478 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 TRPC4Q9UBN4 977 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 RGS17Q9UGC6 210 aaPredicted RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 IL20RAQ9UHF4 553 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 ST6GALNAC2Q9UJ37 374 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC13A4Q9UKG4 626 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 SPATA2Q9UM82 520 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 BAIAP2Q9UQB8 552 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 CA5BQ9Y2D0 317 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 RWDD3Q9Y3V2 267 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 CHST2Q9Y4C5 530 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 CASP8AP2Q9UKL3 1982 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 COL4A2P08572 1712 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CDHR4A6H8M9 788 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 GLTPD2A6NH11 291 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CPSF4LA6NMK7 179 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 A8MUA0 341 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 MPTX1A8MV57 137 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 MCRIP1C9JLW8 97 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 GABARAPH6UMI1 98 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 L7N2F9 121 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 AIPO00170 330 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ABCD4O14678 606 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PGRMC2O15173 223 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FLRT2O43155 660 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 EMC8O43402 210 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PIP5K1CO60331 668 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PSPNO60542 156 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FMO6PO60774 539 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 REM1O75628 298 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RP2O75695 350 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 LYPD3O95274 346 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 SLC2A10O95528 541 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 LDOC1O95751 146 aaPredicted RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CH25HO95992 272 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 EGFP01133 1207 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 TFP02787 698 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 MT-ND4P03905 459 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RPN2P04844 631 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ATP1B1P05026 303 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 HMGN2P05204 90 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CKMP06732 381 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CTSLP07711 333 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 SBK2P0C263 348 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ELFN1P0C7U0 828 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 IFNGR1P15260 489 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PPP3CBP16298 524 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 NT5EP21589 574 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 TBXA2RP21731 343 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RPS4Y1P22090 263 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ATP6V1E1P36543 226 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RECQLP46063 649 aaPredicted RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 NCBP2P52298 156 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RGS8P57771 180 aaPredicted RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FXYD6P3P58550 94 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 RAB8AP61006 207 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ACTA2P62736 377 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ACTG2P63267 376 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PRR5P85299 388 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF85Q03923 595 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 DPTQ07507 201 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FOXD4Q12950 439 aaPredicted RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 SNTB2Q13425 540 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 UBXN2BQ14CS0 331 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 CDK5R1Q15078 307 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 MPPED2Q15777 294 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ZIC1Q15915 447 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ACSM3Q53FZ2 586 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 EIPR1Q53HC9 387 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ZNF805Q5CZA5 627 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 FAM27D1Q5T7N8 215 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PIP5KL1Q5T9C9 394 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 PLBD1Q6P4A8 553 aa4.32□□□□□ -1.72
SMARCC1-206ENST00000485737 ARL9Q6T311 187 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms