RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ROBO4Q8WZ75 1007 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ADGRG7Q96K78 797 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 DMRTA2Q96SC8 542 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 KLHL28Q9NXS3 571 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 DOPEY2Q9Y3R5 2298 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ETV2O00321 342 aaPredicted RBP10.66□□□□□ -0.7
APTX-227ENST00000485479 WDR1O75083 606 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 HSD17B1P14061 328 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 UQCRBP14927 111 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ENPP1P22413 925 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 CBLP22681 906 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ELK4P28324 431 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 HTR1EP28566 365 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 POLR2HP52434 150 aaKnown RBP10.66□□□□□ -0.7
APTX-227ENST00000485479 CDH12P55289 794 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 SELENOWP63302 87 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 FOXF2Q12947 444 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 PIN1Q13526 163 aaPredicted RBP10.66□□□□□ -0.7
APTX-227ENST00000485479 ALG10BQ5I7T1 473 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 HBMQ6B0K9 141 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 WBP2NLQ6ICG8 309 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 FKBP9P1Q75LS8 142 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 PM20D2Q8IYS1 436 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 ADAMTS16Q8TE57 1224 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 DTNBP1Q96EV8 351 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 UCN2Q96RP3 112 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 NDE1Q9NXR1 346 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 AP4B1Q9Y6B7 739 aa10.66□□□□□ -0.7
APTX-227ENST00000485479 A0A0G2JNJ9 132 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 E9PLN8 166 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 KPNA4O00629 521 aaPredicted RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 DIRAS1O95057 198 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 LDLRP01130 860 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 MT-ND1P03886 318 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 CXCR1P25024 350 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 ADH6P28332 368 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 MYBPHQ13203 477 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 CBLL1Q75N03 491 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 CHMP1BQ7LBR1 199 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 ATG4DQ86TL0 474 aaPredicted RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 RANBP3LQ86VV4 465 aaPredicted RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 OR2V1Q8NHB1 315 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 ABHD3Q8WU67 409 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 OSTF1Q92882 214 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 SDCCAG3Q96C92 435 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 INTS12Q96CB8 462 aaKnown RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 VKORC1Q9BQB6 163 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 ADAM19Q9H013 955 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 ADPRHL2Q9NX46 363 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 CLCF1Q9UBD9 225 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 RPS6KB2Q9UBS0 482 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 Q9UFV3 132 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 TESQ9UGI8 421 aaKnown RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 BAG5Q9UL15 447 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 SLC7A7Q9UM01 511 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 AP3M1Q9Y2T2 418 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 NCOA6Q14686 2063 aaPredicted RBP10.65□□□□□ -0.7
APTX-227ENST00000485479 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
APTX-227ENST00000485479 A0A0B4J2E0 115 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 A0A1B0GUH1 482 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 A0A1B0GX12 115 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 AHRRA9YTQ3 701 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 ZNF814B7Z6K7 855 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 LRRN3E7EW58 273 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 hCG_2039718K7EN88 272 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 SYT5O00445 386 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 RAMP1O60894 148 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 PRKD3O94806 890 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 GABRA1P14867 456 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 APOBEC1P41238 236 aaKnown RBP10.65□□□□□ -0.71
APTX-227ENST00000485479 DIO1P49895 249 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 LSM11P83369 360 aaKnown RBP eCLIP10.65□□□□□ -0.71
APTX-227ENST00000485479 EGR4Q05215 589 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 ESPNLQ6ZVH7 1005 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 LIX1LQ8IVB5 337 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 INTS1Q8N201 2190 aaKnown RBP10.65□□□□□ -0.71
APTX-227ENST00000485479 FAM26EQ8N5C1 309 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 ZNF775Q96BV0 537 aaPredicted RBP10.65□□□□□ -0.71
APTX-227ENST00000485479 CADM1Q9BY67 442 aaKnown RBP10.65□□□□□ -0.71
APTX-227ENST00000485479 UCK2Q9BZX2 261 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 AMBRA1Q9C0C7 1298 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 HHATLQ9HCP6 504 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 SEC14L4Q9UDX3 406 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 RNF6Q9Y252 685 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 SLC9A8Q9Y2E8 581 aa10.65□□□□□ -0.71
APTX-227ENST00000485479 NBPF19A0A087WUL8 3843 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 SPTBN1Q01082 2364 aaKnown RBP10.64□□□□□ -0.71
APTX-227ENST00000485479 SLC22A20A6NK97 555 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 ELOA3DA6NLF2 546 aaPredicted RBP10.64□□□□□ -0.71
APTX-227ENST00000485479 FAM90A27PA6NNH2 459 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 FAAHO00519 579 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 IMPDH2P12268 514 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 BMP5P22003 454 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 RPS5P46782 204 aaKnown RBP10.64□□□□□ -0.71
APTX-227ENST00000485479 PER3P56645 1201 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 CARD18P57730 90 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 SIRPAP78324 504 aa10.64□□□□□ -0.71
APTX-227ENST00000485479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms