RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FADDQ13158 208 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 TSC22D1Q15714 1073 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 GCNT6Q5T4J0 391 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 TMPPEQ6ZT21 453 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 CADM2Q8N3J6 435 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 SLC25A43Q8WUT9 341 aaPredicted RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 PSD2Q9BQI7 771 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 ZNF385DQ9H6B1 395 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 CACYBPQ9HB71 228 aaKnown RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 A4GALTQ9NPC4 353 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 FGFR1OP2Q9NVK5 253 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 OSGIN1Q9UJX0 560 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 ING1Q9UK53 422 aaPredicted RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 CHST2Q9Y4C5 530 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 SPIN1Q9Y657 262 aaPredicted RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 ROS1P08922 2347 aa10.93□□□□□ -0.66
MSH5-216ENST00000484309 RAI1Q7Z5J4 1906 aaPredicted RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 PRRC2AP48634 2157 aaKnown RBP10.93□□□□□ -0.66
MSH5-216ENST00000484309 TRBV5-3A0A0A0MS03 114 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 A0A0G2JPF8 293 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 A0A1W2PP18 115 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 ZC3H12DA2A288 527 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 HNRNPCL2B2RXH8 293 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 HNRNPCL3B7ZW38 293 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 HNRNPCL1O60812 293 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 YES1P07947 543 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 HNRNPCL4P0DMR1 293 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 ARAFP10398 606 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 BMP2P12643 396 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 UQCRBP14927 111 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 EDNRAP25101 427 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 ACAA2P42765 397 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 POLR2HP52434 150 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 ART1P52961 327 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 OR2B6P58173 313 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 CSNK2A1P68400 391 aaPredicted RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 HOXC5Q00444 222 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 GUCY1A3Q02108 690 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 BNIP2Q12982 314 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 LARS2Q15031 903 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 ZNF311Q5JNZ3 666 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 STAC2Q6ZMT1 411 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 BEND4Q6ZU67 534 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 DHDDSQ86SQ9 333 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 SERPINA11Q86U17 422 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 STK32CQ86UX6 486 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 BBS10Q8TAM1 723 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 PMM1Q92871 262 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 PIK3IP1Q96FE7 263 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 CCM2LQ9NUG4 571 aaPredicted RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 THUMPD1Q9NXG2 353 aaKnown RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 KLHL9Q9P2J3 617 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 PRSS50Q9UI38 385 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 ST6GALNAC2Q9UJ37 374 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 LEF1Q9UJU2 399 aaPredicted RBP10.92□□□□□ -0.66
MSH5-216ENST00000484309 TRIM33Q9UPN9 1127 aa10.92□□□□□ -0.66
MSH5-216ENST00000484309 DEFB108AA8MXU0 73 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ZNF814B7Z6K7 855 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ANGPT2O15123 496 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 CYTIPO60759 359 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 RAMP1O60894 148 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 PGM3O95394 542 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 THBDP07204 575 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 THBS1P07996 1170 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 IMPDH2P12268 514 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 AQP1P29972 269 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 SLC1A3P43003 542 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 HTR3AP46098 478 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 MTPNP58546 118 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 SELPLGQ14242 412 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 RNF220Q5VTB9 566 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ABLIM2Q6H8Q1 611 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 CGB2Q6NT52 195 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 DLEU7Q6UYE1 221 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 WFDC8Q8IUA0 241 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 CCDC103Q8IW40 242 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ZNF440Q8IYI8 595 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 SLC43A2Q8N370 569 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 STON2Q8WXE9 905 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 CPPED1Q9BRF8 314 aaPredicted RBP10.91□□□□□ -0.66
MSH5-216ENST00000484309 SPATA9Q9BWV2 254 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 RSPO3Q9BXY4 272 aaPredicted RBP10.91□□□□□ -0.66
MSH5-216ENST00000484309 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 BCL2L10Q9HD36 194 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ZNF226Q9NYT6 803 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ZNF232Q9UNY5 417 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 NDUFAF1Q9Y375 327 aa10.91□□□□□ -0.66
MSH5-216ENST00000484309 ITPR3Q14573 2671 aa10.9□□□□□ -0.66
MSH5-216ENST00000484309 EVPLLA8MZ36 301 aa10.9□□□□□ -0.66
MSH5-216ENST00000484309 FAAHO00519 579 aa10.9□□□□□ -0.66
MSH5-216ENST00000484309 GCM2O75603 506 aaPredicted RBP10.9□□□□□ -0.66
MSH5-216ENST00000484309 PMS2P2O95744 297 aa10.9□□□□□ -0.66
MSH5-216ENST00000484309 ADAP00813 363 aa10.9□□□□□ -0.66
MSH5-216ENST00000484309 VIMP08670 466 aaKnown RBP10.9□□□□□ -0.66
MSH5-216ENST00000484309 TROVE2P10155 538 aaKnown RBP eCLIP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms