RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 P2RX1P51575 399 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 NUDT6P53370 316 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 CBFBQ13951 182 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 TRIP6Q15654 476 aaKnown RBP23.96■■□□□ 1.43
SHOX2-204ENST00000483851 ELOA3BQ3SY89 546 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 SMARCD3Q6STE5 483 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 STX19Q8N4C7 294 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 ELOA3Q8NG57 546 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 C9orf43Q8TAL5 461 aaPredicted RBP23.96■■□□□ 1.43
SHOX2-204ENST00000483851 NDNFQ8TB73 568 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 RTN4RQ9BZR6 473 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 UBQLN3Q9H347 655 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 PALMDQ9NP74 551 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 WDFY4Q6ZS81 3184 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 WWP2O00308 870 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 GRK5P34947 590 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 CRYZQ08257 329 aaKnown RBP23.96■■□□□ 1.43
SHOX2-204ENST00000483851 BTBD16Q32M84 506 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 OR4Q3Q8NH05 313 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 ZNF563Q8TA94 476 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 DYNC2LI1Q8TCX1 351 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 SGTBQ96EQ0 304 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 SAMD8Q96LT4 415 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 PCDHGB6Q9Y5F9 930 aa23.96■■□□□ 1.43
SHOX2-204ENST00000483851 SURF4O15260 269 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 CDC40O60508 579 aaKnown RBP eCLIP23.95■■□□□ 1.42
SHOX2-204ENST00000483851 CD36P16671 472 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 LIPAP38571 399 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 ST3GAL4Q11206 333 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 SYT14P1Q58G82 188 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 CLEC12AQ5QGZ9 265 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 SLC30A6Q6NXT4 461 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 LNX2Q8N448 690 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 PLEKHA8Q96JA3 519 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 CDCA4Q9BXL8 241 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 IRF2BPLQ9H1B7 796 aa23.95■■□□□ 1.42
SHOX2-204ENST00000483851 STSP08842 583 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 TGM1P22735 817 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 C17orf67Q0P5P2 114 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 RTL4Q6ZR62 310 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 NDUFAF7Q7L592 441 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 OAFQ86UD1 273 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 THAP3Q8WTV1 239 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-204ENST00000483851 LIPHQ8WWY8 451 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 LRR1Q96L50 414 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 CORINQ9Y5Q5 1042 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 IRGMA1A4Y4 181 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 C9orf172C9J069 976 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 FBXO45P0C2W1 286 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 SUMO3P55854 103 aaPredicted RBP23.94■■□□□ 1.42
SHOX2-204ENST00000483851 FXYD6P3P58550 94 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 VBP1P61758 197 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 LYPD8Q6UX82 237 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 Q6ZNX1 250 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 ZBTB46Q86UZ6 589 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 ESX1Q8N693 406 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 OR11G2Q8NGC1 345 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 B4GALNT2Q8NHY0 566 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 FN3KQ9H479 309 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 DNAJC27Q9NZQ0 273 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 TCFL5Q9UL49 500 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 PMF1-BGLAPU3KQ54 211 aa23.94■■□□□ 1.42
SHOX2-204ENST00000483851 A0A0C4DFX4 3053 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 BHLHE40O14503 412 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 ADAM10O14672 748 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 PRODHO43272 600 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 ZNF354AO60765 605 aaPredicted RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 PTNP21246 168 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 NCS1P62166 190 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 HES3Q5TGS1 186 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 RNLSQ5VYX0 342 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 DHRS13Q6UX07 377 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 C16orf47Q6ZP98 133 aaPredicted RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 TIPARPQ7Z3E1 657 aaKnown RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 OR13C2Q8NGS9 318 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 RPL3LQ92901 407 aaKnown RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 RFKQ969G6 155 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 LGALS12Q96DT0 336 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 CRELD1Q96HD1 420 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 SH3YL1Q96HL8 342 aaPredicted RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 ZNF582Q96NG8 517 aaPredicted RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 MRPS18AQ9NVS2 196 aaKnown RBP23.93■■□□□ 1.42
SHOX2-204ENST00000483851 ETAA1Q9NY74 926 aa23.93■■□□□ 1.42
SHOX2-204ENST00000483851 WDR87Q6ZQQ6 2873 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 KDM4EB2RXH2 506 aaPredicted RBP23.92■■□□□ 1.42
SHOX2-204ENST00000483851 TCN2P20062 427 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 MST1P26927 711 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 OPRL1P41146 370 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 FBXW4P57775 412 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 SSPNQ14714 243 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 CACTIN-AS1Q8N1I8 211 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 PRSS33Q8NF86 280 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 CT55Q8WUE5 264 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.92■■□□□ 1.42
SHOX2-204ENST00000483851 FARSAQ9Y285 508 aaKnown RBP23.92■■□□□ 1.42
SHOX2-204ENST00000483851 NSG1A0A0A6YYJ2 146 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 SOCS6O14544 535 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 SCO2O43819 266 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 DKK1O94907 266 aa23.92■■□□□ 1.42
SHOX2-204ENST00000483851 ADRA2AP08913 450 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms