RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 SLC19A3Q9BZV2 496 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 RPS6KB2Q9UBS0 482 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 C15orf41Q9Y2V0 281 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 PCDHGB6Q9Y5F9 930 aa7.47□□□□□ -1.21
USP4-210ENST00000483212 PCDHGA9Q9Y5G4 932 aaKnown RBP7.47□□□□□ -1.21
USP4-210ENST00000483212 A0A087WZY1 265 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 TMEM72A0PK05 275 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ZC3H12DA2A288 527 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 ENO4A6NNW6 628 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 SHISA8B8ZZ34 492 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 CDC42EP2O14613 210 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 FZD7O75084 574 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 CBR3O75828 277 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 NUDT14O95848 222 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 RFPL3SP0C7P2 107 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 IFI30P13284 250 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 POU2F1P14859 743 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 FUT1P19526 365 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 IL11P20809 199 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 EPHA2P29317 976 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 SRD5A2P31213 254 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 HTR3AP46098 478 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 HSPA13P48723 471 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 DSCR4P56555 118 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 FXYD6P3P58550 94 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 B3GALT5-AS1P59052 145 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ARG2P78540 354 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ALDH6A1Q02252 535 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 LTBQ06643 244 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 MERTKQ12866 999 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 TSPAN31Q12999 210 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 HYAL4Q2M3T9 481 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 RFX4Q33E94 735 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ZIK1Q3SY52 487 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 SLC36A3Q495N2 470 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 C6orf52Q5T4I8 152 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 TTC33Q6PID6 262 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 IGFL3Q6UXB1 125 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 UNQ6494/PRO21346Q6UXR6 183 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 USP51Q70EK9 711 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 SLC46A3Q7Z3Q1 461 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 GALNTL5Q7Z4T8 443 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 GALNT5Q7Z7M9 940 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 KIF18BQ86Y91 864 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 P3H2Q8IVL5 708 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 CHERPQ8IWX8 916 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 GTPBP8Q8N3Z3 284 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 ZFP62Q8NB50 900 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 OR1J4Q8NGS1 313 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 PIGXQ8TBF5 258 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 GNPDA2Q8TDQ7 276 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 LIPHQ8WWY8 451 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 TMEM234Q8WY98 164 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 ZBTB8AQ96BR9 441 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 BPIFA2Q96DR5 249 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 MRGPRX4Q96LA9 322 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 PITX2Q99697 317 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ADI1Q9BV57 179 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 PTDSS2Q9BVG9 487 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 UCK2Q9BZX2 261 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 OR2B2Q9GZK3 357 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 VCXQ9H320 206 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 ZNF703Q9H7S9 590 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 PAPOLBQ9NRJ5 636 aaKnown RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 KRT84Q9NSB2 600 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 KIF17Q9P2E2 1029 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 VDAC3Q9Y277 283 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 POFUT2Q9Y2G5 429 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 KLF13Q9Y2Y9 288 aaPredicted RBP7.46□□□□□ -1.22
USP4-210ENST00000483212 TMED7Q9Y3B3 224 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 MED31Q9Y3C7 131 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 AP4B1Q9Y6B7 739 aa7.46□□□□□ -1.22
USP4-210ENST00000483212 PCNX3Q9H6A9 2034 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ANKRD11Q6UB99 2663 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 HTR3EA5X5Y0 456 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 LRRN3E7EW58 273 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 H0YAE9 185 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 K7EM74 188 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 KPNA4O00629 521 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 SLC16A6O15403 523 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ZNF208O43345 1280 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 DENRO43583 198 aaKnown RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 SUSD5O60279 629 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 PTP4A3O75365 173 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 BGLAPP02818 100 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 IGFBP1P08833 259 aaPredicted RBP7.45□□□□□ -1.22
USP4-210ENST00000483212 TSPAN19P0C672 248 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 OSMP13725 252 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CD46P15529 392 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 ZNF17P17021 662 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 GSTM3P21266 225 aa7.45□□□□□ -1.22
USP4-210ENST00000483212 CHMP24386 653 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms