RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
IFT88-206ENST00000482172 MEPEQ9NQ76 525 aaPredicted RBP11.34□□□□□ -0.59
IFT88-206ENST00000482172 TUBA8Q9NY65 449 aaPredicted RBP11.34□□□□□ -0.59
IFT88-206ENST00000482172 C15orf41Q9Y2V0 281 aa11.34□□□□□ -0.59
IFT88-206ENST00000482172 RAXQ9Y2V3 346 aa11.34□□□□□ -0.59
IFT88-206ENST00000482172 TMED7Q9Y3B3 224 aa11.34□□□□□ -0.59
IFT88-206ENST00000482172 A0A0G2JMM0 328 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 A0A1W2PPB8 328 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 A0A1W2PRS3 328 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 LRRC3CA6NJW4 275 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 KIR3DP1A8MWS1 328 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 G3V3Y1 287 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 ZNF17P17021 662 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 DPP4P27487 766 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 ESRRGP62508 458 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
IFT88-206ENST00000482172 ALDH6A1Q02252 535 aaKnown RBP11.33□□□□□ -0.6
IFT88-206ENST00000482172 MERTKQ12866 999 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 TMEM44Q2T9K0 475 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 ZNF766Q5HY98 468 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 WLSQ5T9L3 541 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 ANKRD34AQ69YU3 496 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 KLHL17Q6TDP4 642 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 GTPBP8Q8N3Z3 284 aaPredicted RBP11.33□□□□□ -0.6
IFT88-206ENST00000482172 DHRSXQ8N5I4 330 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 OR6S1Q8NH40 331 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 LIPHQ8WWY8 451 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 JSRP1Q96MG2 331 aaPredicted RBP11.33□□□□□ -0.6
IFT88-206ENST00000482172 GNRHR2Q96P88 292 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 GABARAPL3Q9BY60 117 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 UBQLN3Q9H347 655 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 SERINC1Q9NRX5 453 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 B4GALT7Q9UBV7 327 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 VDAC3Q9Y277 283 aa11.33□□□□□ -0.6
IFT88-206ENST00000482172 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 PINLYPA6NC86 204 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 A8MVM7 634 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 C1QTNF9BB2RNN3 333 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 E9PQ18 207 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 SLC16A6O15403 523 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 SUSD5O60279 629 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 PIP5K1CO60331 668 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ZIC3O60481 467 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 NPIPB7O75200 414 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 SNAP29O95721 258 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ITGB2P05107 769 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 C1QTNF9P0C862 333 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 IFI30P13284 250 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 OSMP13725 252 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ACADSP16219 412 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 HK1P19367 917 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ELK4P28324 431 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 CLK1P49759 484 aaKnown RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 GPR85P60893 370 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 EGR4Q05215 589 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 FOXF1Q12946 379 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
IFT88-206ENST00000482172 CMPK2Q5EBM0 449 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 TTC23Q5W5X9 447 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 RASSF6Q6ZTQ3 369 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ZADH2Q8N4Q0 377 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 CLDN22Q8N7P3 220 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 ZNF555Q8NEP9 628 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 POC1BQ8TC44 478 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 TFAP2CQ92754 450 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 Q9H521 79 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 QPCTLQ9NXS2 382 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 REV1Q9UBZ9 1251 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 CHRNA9Q9UGM1 479 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 SPIN1Q9Y657 262 aaPredicted RBP11.32□□□□□ -0.6
IFT88-206ENST00000482172 EML6Q6ZMW3 1958 aa11.32□□□□□ -0.6
IFT88-206ENST00000482172 TRAV36DV7A0A075B6V5 113 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 EFCAB9A8MZ26 197 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 LINC01387J3KSC0 135 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 TAF4O00268 1085 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
IFT88-206ENST00000482172 MITFO75030 526 aaPredicted RBP11.31□□□□□ -0.6
IFT88-206ENST00000482172 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
IFT88-206ENST00000482172 HPNP05981 417 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 POU2F1P14859 743 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 CAPGP40121 348 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 SLC9A3P48764 834 aa11.31□□□□□ -0.6
IFT88-206ENST00000482172 MEOX1P50221 254 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms