RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 KIRREL3Q8IZU9 778 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 ARFGAP2Q8N6H7 521 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 OR52E6Q96RD3 313 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 PANX1Q96RD7 426 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 SLC38A1Q9H2H9 487 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 CXorf56Q9H5V9 222 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 ZNF701Q9NV72 531 aaPredicted RBP16.42■□□□□ 0.22
CLK1-211ENST00000481641 CHRNA9Q9UGM1 479 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 GPR45Q9Y5Y3 372 aa16.42■□□□□ 0.22
CLK1-211ENST00000481641 TMEM120BA0PK00 339 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 RAMP1O60894 148 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 PGRP06401 933 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 SOD3P08294 240 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 ATP5J2P56134 94 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 CSNK2A1P68400 391 aaPredicted RBP16.41■□□□□ 0.22
CLK1-211ENST00000481641 BSPH1Q075Z2 132 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 ABLIM2Q6H8Q1 611 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 GRINAQ7Z429 371 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 SPATA19Q7Z5L4 167 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 CCDC103Q8IW40 242 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 KBTBD8Q8NFY9 601 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 PIWIL2Q8TC59 973 aaKnown RBP16.41■□□□□ 0.22
CLK1-211ENST00000481641 SLC25A43Q8WUT9 341 aaPredicted RBP16.41■□□□□ 0.22
CLK1-211ENST00000481641 POTEKPQ9BYX7 375 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 ESRP2Q9H6T0 727 aaKnown RBP16.41■□□□□ 0.22
CLK1-211ENST00000481641 SLC6A13Q9NSD5 602 aa16.41■□□□□ 0.22
CLK1-211ENST00000481641 ZNF716A6NP11 495 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 HDAC3O15379 428 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 SNNO75324 88 aaPredicted RBP16.4■□□□□ 0.22
CLK1-211ENST00000481641 PAX1P15863 534 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 NTF4P34130 210 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 OR2B6P58173 313 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 NXNQ6DKJ4 435 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 ADAM5Q6NVV9 412 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 OIT3Q8WWZ8 545 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 TRNT1Q96Q11 434 aaKnown RBP16.4■□□□□ 0.22
CLK1-211ENST00000481641 NGBQ9NPG2 151 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 EXOSC3Q9NQT5 275 aaKnown RBP16.4■□□□□ 0.22
CLK1-211ENST00000481641 THAP1Q9NVV9 213 aa16.4■□□□□ 0.22
CLK1-211ENST00000481641 SPIN1Q9Y657 262 aaPredicted RBP16.4■□□□□ 0.22
CLK1-211ENST00000481641 TMEM72A0PK05 275 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 AGAP5A6NIR3 686 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 FAM171A2A8MVW0 826 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 DANCRP0C864 163 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 RPS4XP62701 263 aaKnown RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 PPA1Q15181 289 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 MAPK11Q15759 364 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 ZNF672Q499Z4 452 aaPredicted RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 SLC9B1Q4ZJI4 515 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 DNAJC14Q6Y2X3 702 aaPredicted RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 LRRC74BQ6ZQY2 392 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 UBE2J2Q8N2K1 259 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 ZNF433Q8N7K0 673 aaPredicted RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 SMAP2Q8WU79 429 aaPredicted RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 FBXW5Q969U6 566 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 NPAP1Q9NZP6 1156 aa16.39■□□□□ 0.21
CLK1-211ENST00000481641 NOSIPQ9Y314 301 aaKnown RBP16.39■□□□□ 0.21
CLK1-211ENST00000481641 IGKV3D-15A0A087WSY6 115 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 TMED7-TICAM2A0A0A6YYA0 188 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 TRPC5OSA6NMA1 111 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 PMS2P2O95744 297 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 NR2F1P10589 423 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 GGT1P19440 569 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 COX5AP20674 150 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 PCSK6P29122 969 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 CDKN1AP38936 164 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 FOXG1P55316 489 aaPredicted RBP16.38■□□□□ 0.21
CLK1-211ENST00000481641 CROCCP2Q86T23 111 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 WDR60Q8WVS4 1066 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 ZHX1-C8orf76Q96EF9 292 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 MTHFD2LQ9H903 347 aaPredicted RBP16.38■□□□□ 0.21
CLK1-211ENST00000481641 EMC3Q9P0I2 261 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 OSGIN1Q9UJX0 560 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 LIPT1Q9Y234 373 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 TMED7Q9Y3B3 224 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 HDGFL3Q9Y3E1 203 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 MAGED1Q9Y5V3 778 aaPredicted RBP16.38■□□□□ 0.21
CLK1-211ENST00000481641 ABCA2Q9BZC7 2435 aa16.38■□□□□ 0.21
CLK1-211ENST00000481641 A0A1W2PR80 420 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 ZC3H12DA2A288 527 aaKnown RBP16.37■□□□□ 0.21
CLK1-211ENST00000481641 OVOL3O00110 214 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 RFXANKO14593 260 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 RAD51DO75771 328 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 IMPDH2P12268 514 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 IL7RP16871 459 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 PTNP21246 168 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
CLK1-211ENST00000481641 TACR3P29371 465 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 MAGOHP61326 146 aaKnown RBP16.37■□□□□ 0.21
CLK1-211ENST00000481641 FAPQ12884 760 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 TNK1Q13470 666 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 PDK3Q15120 406 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 PGGHGQ32M88 737 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 GTDC1Q4AE62 458 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 MRPL2Q5T653 305 aaKnown RBP16.37■□□□□ 0.21
CLK1-211ENST00000481641 FBXW9Q5XUX1 488 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 MAVSQ7Z434 540 aa16.37■□□□□ 0.21
CLK1-211ENST00000481641 PIGXQ8TBF5 258 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms