RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PRKCAP17252 672 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 MAGEB1P43366 347 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 SLC16A1P53985 500 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 UBE2NP61088 152 aaKnown RBP10.07□□□□□ -0.8
USP11-208ENST00000480104 TPM4P67936 248 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 FAM205BPQ63HN1 556 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 C3orf33Q6P1S2 294 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 ZC3HC1Q86WB0 502 aaKnown RBP10.07□□□□□ -0.8
USP11-208ENST00000480104 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 METTL4Q8N3J2 472 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 BHLHE22Q8NFJ8 381 aaPredicted RBP10.07□□□□□ -0.8
USP11-208ENST00000480104 TRPC4APQ8TEL6 797 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 HES6Q96HZ4 224 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 BOD1Q96IK1 185 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 TBX15Q96SF7 602 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 LMF2Q9BU23 707 aaKnown RBP10.07□□□□□ -0.8
USP11-208ENST00000480104 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 PRDM13Q9H4Q3 707 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 ZNF385DQ9H6B1 395 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 UBAP1Q9NZ09 502 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 RNF11Q9Y3C5 154 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 U3KQK5 164 aa10.07□□□□□ -0.8
USP11-208ENST00000480104 TRAPPC2LH3BP13 241 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 SULT2B1O00204 365 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 TRAF3IP2O43734 574 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 SKAP2O75563 359 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 WISP3O95389 354 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 ESRRBO95718 433 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 IGKV3-15P01624 115 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 FUT4P22083 530 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 RNF144AP50876 292 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 RPL15P61313 204 aaKnown RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 CSNK2A1P68400 391 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 DMRTC1Q5HYR2 192 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 SPANXN3Q5MJ09 141 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 TRMT10BQ6PF06 316 aaKnown RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 TMEM107Q6UX40 140 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 TMPPEQ6ZT21 453 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 LRP11Q86VZ4 500 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 CCDC103Q8IW40 242 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 OR1K1Q8NGR3 316 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 PIGXQ8TBF5 258 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 ITPKCQ96DU7 683 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 C3orf14Q9HBI5 128 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 NKX1-2Q9UD57 310 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 C19orf53Q9UNZ5 99 aaPredicted RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 INSIG2Q9Y5U4 225 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 ACTL7BQ9Y614 415 aa10.06□□□□□ -0.8
USP11-208ENST00000480104 HUWE1Q7Z6Z7 4374 aaKnown RBP10.06□□□□□ -0.8
USP11-208ENST00000480104 A0A087WV62 115 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ARPC4-TTLL3A0A0A6YYG9 625 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 TRAV40A0A0B4J280 105 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 WI2-2373I1.2A0A1W2PRP0 233 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 CLDN25C9JDP6 229 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 UPK1AO00322 258 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 SCDO00767 359 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 GPR37O15354 613 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 GPR137BO60478 399 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 LGI1O95970 557 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 IGHMP01871 453 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ALOX5P09917 674 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 HPGDP15428 266 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ASMTP46597 345 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 CCL8P80075 99 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 GALNT1Q10472 559 aaPredicted RBP10.05□□□□□ -0.8
USP11-208ENST00000480104 TMEM86BQ8N661 226 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ST7LQ8TDW4 575 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 BCL2L2Q92843 193 aaPredicted RBP10.05□□□□□ -0.8
USP11-208ENST00000480104 DNAJA3Q96EY1 480 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 QRSL1Q9H0R6 528 aaKnown RBP10.05□□□□□ -0.8
USP11-208ENST00000480104 TOR3AQ9H497 397 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 DENND2DQ9H6A0 471 aaPredicted RBP10.05□□□□□ -0.8
USP11-208ENST00000480104 POPDC3Q9HBV1 291 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 GIMAP4Q9NUV9 329 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 DDX18Q9NVP1 670 aaKnown RBP10.05□□□□□ -0.8
USP11-208ENST00000480104 NUDT4Q9NZJ9 180 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ZKSCAN5Q9Y2L8 839 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 ANGPTL3Q9Y5C1 460 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
USP11-208ENST00000480104 A0A096LPE4 126 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 IGHV1-69-2A0A0G2JMI3 117 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 A0A1W2PPZ6 126 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 ISPDA4D126 451 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
USP11-208ENST00000480104 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
USP11-208ENST00000480104 SUPT3HB4E1H0 165 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 UBXN8O00124 270 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 UGDHO60701 494 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 SUPT3HO75486 399 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 TPM3P06753 285 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 MELTFP08582 738 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 IL3P08700 152 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
USP11-208ENST00000480104 NR4A1P22736 598 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 PAX7P23759 505 aa10.04□□□□□ -0.8
USP11-208ENST00000480104 EGR3Q06889 387 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms