RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 OR4C15Q8NGM1 316 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 NEIL3Q8TAT5 605 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 SLC7A13Q8TCU3 470 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 STK35Q8TDR2 534 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 ACOT11Q8WXI4 607 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 SFXN2Q96NB2 322 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 SLX1AQ9BQ83 275 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 PSD2Q9BQI7 771 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 BDH2Q9BUT1 245 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 SLC6A15Q9H2J7 730 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 DCLRE1BQ9H816 532 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 REEP1Q9H902 201 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 SERINC1Q9NRX5 453 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 VNN3Q9NY84 501 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMED7Q9Y3B3 224 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 LIPGQ9Y5X9 500 aa11.33□□□□□ -0.6
TRAPPC12-218ENST00000479897 IGKV1D-42A0A075B6H8 117 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 ARRDC5A6NEK1 342 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 A8MVM7 634 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 SHISA8B8ZZ34 492 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 AQP7O14520 342 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 EFNA2O43921 213 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 WISP1O95388 367 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 ACTL6AO96019 429 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 FPR1P21462 350 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 FUT4P22083 530 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 CXCR1P25024 350 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 DNAJA1P31689 397 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 GCKP35557 465 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 TDGF1P3P51864 188 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 RAC1P63000 192 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 FOXK1P85037 733 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 EGR4Q05215 589 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 RCN1Q15293 331 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 TOMM20Q15388 145 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 HMBOX1Q6NT76 420 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 NKAIN4Q8IVV8 208 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 PQLC1Q8N2U9 271 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 LINC00471Q8N535 108 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR6S1Q8NH40 331 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 FAR1Q8WVX9 515 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 LRTOMTQ8WZ04 291 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 NRBF2Q96F24 287 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 GPR137Q96N19 417 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 NTN4Q9HB63 628 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 C6orf203Q9P0P8 240 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 LUZP4Q9P127 313 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 STOML1Q9UBI4 398 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 RPH3AQ9Y2J0 694 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 AP4B1Q9Y6B7 739 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
TRAPPC12-218ENST00000479897 A0A087WUU8 490 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRGV5A0A0B4J1U4 118 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TRBV4-1A0A0J9YWV2 114 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 SH3PXD2BA1X283 911 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 GJE1A6NN92 205 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TNFRSF11BO00300 401 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 GNGT2O14610 69 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 PEPDP12955 493 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF708P17019 499 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 IL11P20809 199 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 LHX2P50458 406 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 UGT2B15P54855 530 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 CRYZQ08257 329 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 BCL2A1Q16548 175 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 KRTCAP3Q53RY4 240 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 SYT14P1Q58G82 188 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 FGD3Q5JSP0 725 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 DCST1Q5T197 706 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 SVOPLQ8N434 492 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM255BQ8WV15 326 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 TMEM239Q8WW34 195 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 DDIT4LQ96D03 193 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 ALPK1Q96QP1 1244 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 PKP2Q99959 881 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 POTEKPQ9BYX7 375 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 RNPEPL1Q9HAU8 725 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 ZNF337Q9Y3M9 751 aa11.31□□□□□ -0.6
TRAPPC12-218ENST00000479897 SHANK1Q9Y566 2161 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 OR14I1A6ND48 311 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 NPIPA5E9PKD4 350 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 DNPH1O43598 174 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 ANPEPP15144 967 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 BMP7P18075 431 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 POU3F2P20265 443 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 CTBP2P56545 445 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 CLDN18P56856 261 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 SEC23BQ15437 767 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 EXOC3L2Q2M3D2 409 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 ARHGAP11AQ6P4F7 1023 aa11.3□□□□□ -0.6
TRAPPC12-218ENST00000479897 PODNL1Q6PEZ8 512 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms