RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CRATP43155 626 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ZFP36L2P47974 494 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 HLCSP50747 726 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 HMGA2P52926 109 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 POU6F2P78424 691 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 MYBPC1Q00872 1141 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ART3Q13508 389 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NPTX1Q15818 432 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NNATQ16517 81 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 VMACQ2NL98 169 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 LINC00303Q3SY05 128 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CEP78Q5JTW2 689 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SAXO2Q658L1 398 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 REP15Q6BDI9 236 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NANOGP8Q6NSW7 305 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 MFSD12Q6NUT3 480 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 XKRXQ6PP77 449 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 IGFL2Q6UWQ7 119 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 IGFL3Q6UXB1 125 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 IL20RBQ6UXL0 311 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 RTL4Q6ZR62 310 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 USP43Q70EL4 1123 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 C16orf62Q7Z3J2 963 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CHERPQ8IWX8 916 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PM20D2Q8IYS1 436 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF441Q8N8Z8 693 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TEX19Q8NA77 164 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF527Q8NB42 609 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM178AQ8NBL3 297 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SYT8Q8NBV8 401 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 OR10Z1Q8NGY1 313 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PSMF1Q92530 271 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 GTF2H4Q92759 462 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ADIPOR1Q96A54 375 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ROPN1LQ96C74 230 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SPACA9Q96E40 222 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 OMA1Q96E52 524 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NEURL3Q96EH8 262 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF486Q96H40 463 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 REXO5Q96IC2 774 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SGCZQ96LD1 299 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 VSTM2LQ96N03 204 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 INPP5KQ9BT40 448 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SOX7Q9BT81 388 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC106Q9BWC9 280 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 HOXD1Q9GZZ0 328 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PAIP1Q9H074 479 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 NXF5Q9H1B4 397 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SLC25A18Q9H1K4 315 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 PIGUQ9H490 435 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 SERHL2Q9H4I8 314 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRA2Q9H9E1 313 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 LIN28AQ9H9Z2 209 aaKnown RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 EFCAB1Q9HAE3 211 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 DUSP22Q9NRW4 184 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ARL8BQ9NVJ2 186 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 CALML5Q9NZT1 146 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 ARMCX1Q9P291 453 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 KIF17Q9P2E2 1029 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 P2RX2Q9UBL9 471 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 AP3M1Q9Y2T2 418 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 KLF13Q9Y2Y9 288 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-209ENST00000479532 TESMINQ9Y4I5 508 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 AP4B1Q9Y6B7 739 aa5.66□□□□□ -1.5
SF3B1-209ENST00000479532 MED13Q9UHV7 2174 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ASPMQ8IZT6 3477 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ARPC4-TTLL3A0A0A6YYG9 625 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 A0A0G2JNJ9 132 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 OR6C70A6NIJ9 312 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CLDN25C9JDP6 229 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 KLRC4-KLRK1H3BQV0 150 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF254O75437 659 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SLC25A12O75746 678 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 NKX2-2O95096 273 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 KNG1P01042 644 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CT45A8P0DMV1 189 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CT45A9P0DMV2 189 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 PIGAP37287 484 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 SOX3P41225 446 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CDKN2CP42773 168 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CBX5P45973 191 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 RFX3P48380 749 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ETV1P50549 477 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 IST1P53990 364 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 PNLIPRP2P54317 469 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 KLRB1Q12918 225 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 BAMBIQ13145 260 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 FADDQ13158 208 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 DUSP8Q13202 625 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 GAB1Q13480 694 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF169Q14929 603 aaPredicted RBP5.65□□□□□ -1.5
SF3B1-209ENST00000479532 OR1C1Q15619 314 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 TSC22D1Q15714 1073 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 NTRK2Q16620 822 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 GPAT3Q53EU6 434 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 CT45A2Q5DJT8 189 aa5.65□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF766Q5HY98 468 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms