RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 NAT8LQ8N9F0 302 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 LILRB4Q8NHJ6 448 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 BCL2L2Q92843 193 aaPredicted RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 MRPL24Q96A35 216 aaKnown RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 RAB40CQ96S21 281 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 NTMT1Q9BV86 223 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 WWP1Q9H0M0 922 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 RBM28Q9NW13 759 aaKnown RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 SPASTQ9UBP0 616 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 MAD2L2Q9UI95 211 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 RARRES3Q9UL19 164 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 ZNF346Q9UL40 294 aaKnown RBP3.93□□□□□ -1.78
CCDC171-207ENST00000478913 EXOC6BQ9Y2D4 811 aa3.93□□□□□ -1.78
CCDC171-207ENST00000478913 A0A1B0GTH9 108 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 SMIM28A0A1B0GU29 152 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ZNF724A8MTY0 619 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 GMNNO75496 209 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ANXA9O76027 345 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 IGHG1P01857 330 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 PTMAP06454 111 aaKnown RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 FHP07954 510 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 CCDC166P0CW27 439 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 B4GALT1P15291 398 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 STIP1P31948 543 aaKnown RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 NAMPTP43490 491 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 GSK3BP49841 420 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ADARP55265 1226 aaKnown RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 KIAA1024LP59773 190 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 RIGQ13278 110 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 SLC17A1Q14916 467 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 OR1C1Q15619 314 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 SGCBQ16585 318 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 WSCD2Q2TBF2 565 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 C1orf189Q5VU69 101 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 TAF3Q5VWG9 929 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 EMBQ6PCB8 327 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 CASC1Q6TDU7 716 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ZSCAN30Q86W11 494 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 MMAAQ8IVH4 418 aaKnown RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 CNPY4Q8N129 248 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ICA1LQ8NDH6 482 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 OR10T2Q8NGX3 314 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 OR4Q3Q8NH05 313 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 AGAP11Q8TF27 550 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ESAMQ96AP7 390 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 C18orf25Q96B23 403 aaPredicted RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 OTUB2Q96DC9 234 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 FOXN4Q96NZ1 517 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 TSPYL1Q9H0U9 437 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 RPS10P5Q9NQ39 176 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 FOXA2Q9Y261 457 aaPredicted RBP3.92□□□□□ -1.78
CCDC171-207ENST00000478913 ARID1AO14497 2285 aa3.92□□□□□ -1.78
CCDC171-207ENST00000478913 IGHV3-16A0A0C4DH30 117 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 A0A1B0GUA9 196 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 UBFD1O14562 309 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 POLR1CO15160 346 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 TXNL1O43396 289 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 NOL4O94818 638 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 HPP00738 406 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 TPBGLP0DKB5 382 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CT45A8P0DMV1 189 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CT45A9P0DMV2 189 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 FOLR2P14207 255 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 FERP16591 822 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 SPRP35270 261 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 LIMK2P53671 638 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 RPL27P61353 136 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 HMGN5P82970 282 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 HSPA14Q0VDF9 509 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CST6Q15828 149 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 STX1AQ16623 288 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CT45A2Q5DJT8 189 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 AGAP7PQ5VUJ5 663 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 NKAIN2Q5VXU1 208 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 FAM199XQ6PEV8 388 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 Q6ZRG5 221 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 PARGQ86W56 976 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 ERC1Q8IUD2 1116 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CCDC71Q8IV32 467 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 WDR49Q8IV35 697 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 STHQ8IWL8 128 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 GVQW1Q8N7I0 195 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 SIDT2Q8NBJ9 832 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 CSNK1G2-AS1Q8NCQ2 148 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 OR6C4Q8NGE1 309 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 GOLGA5Q8TBA6 731 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 ST7LQ8TDW4 575 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 UBTD2Q8WUN7 234 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 SYAP1Q96A49 352 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 C5orf30Q96GV9 206 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 RUNDC3BQ96NL0 473 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 RRAGDQ9NQL2 400 aaPredicted RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 TMEM9Q9P0T7 183 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 APOBEC3BQ9UH17 382 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 MRTO4Q9UKD2 239 aaKnown RBP3.91□□□□□ -1.78
CCDC171-207ENST00000478913 APPL1Q9UKG1 709 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 TSPAN16Q9UKR8 245 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 SCML1Q9UN30 329 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 PLA2G4CQ9UP65 541 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms