RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ASB6Q9NWX5 421 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 TAS2R16Q9NYV7 291 aa12.79□□□□□ -0.36
SMARCE1-209ENST00000478349 HIVEP2P31629 2446 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 CCT8L1PA6NM43 557 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 OVOL3O00110 214 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 MRPL33O75394 65 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 KRT75O95678 551 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 DHRS4L1P0CG22 281 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 POLR2HP52434 150 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 TGFBR3Q03167 851 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 DMTNQ08495 405 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 HHATQ5VTY9 493 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 AP1ARQ63HQ0 302 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 FRRS1Q6ZNA5 592 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 CLEC4FQ8N1N0 589 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 GLB1L3Q8NCI6 653 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 RAB8BQ92930 207 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 ADAD1Q96M93 576 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 PAIP2Q9BPZ3 127 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 NAA11Q9BSU3 229 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 TRIM2Q9C040 744 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 CTPS2Q9NRF8 586 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 CALML5Q9NZT1 146 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 TMEM181Q9P2C4 612 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 KCNE5Q9UJ90 142 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 ING1Q9UK53 422 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 POU2F3Q9UKI9 436 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 TRAPPC4Q9Y296 219 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 MAGED1Q9Y5V3 778 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 ARID1AO14497 2285 aa12.78□□□□□ -0.36
SMARCE1-209ENST00000478349 CENPVL1A0A0U1RR11 272 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 FAM234BA2RU67 622 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 TMEM247A6NEH6 219 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 SLCO1B7G3V0H7 640 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 ABCD4O14678 606 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF208O43345 1280 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 SCN2BO60939 215 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 DBIP07108 87 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 DANCRP0C864 163 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 BMP4P12644 408 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 IL7RP16871 459 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 PTAFRP25105 342 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC16A1P53985 500 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 CASP9P55211 416 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC35A1P78382 337 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 ZSWIM7Q19AV6 140 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 CEP85LQ5SZL2 805 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 LRRC74BQ6ZQY2 392 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 PEX5LQ8IYB4 626 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 KBTBD8Q8NFY9 601 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 WDR60Q8WVS4 1066 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 OR52E6Q96RD3 313 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 SORT1Q99523 831 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 ARMC7Q9H6L4 198 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 MALT1Q9UDY8 824 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
SMARCE1-209ENST00000478349 CFAP73A6NFT4 308 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 C9JVG2 144 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 HMGN4O00479 90 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 FAAHO00519 579 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 HDAC3O15379 428 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 RAD51DO75771 328 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 PGM3O95394 542 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 PGRP06401 933 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 SOD3P08294 240 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 NR2F1P10589 423 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 IDO1P14902 403 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 BGNP21810 368 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 IGHV1-2P23083 117 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 IDH2P48735 452 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 OR2B6P58173 313 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 COPZ1P61923 177 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 FAPQ12884 760 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 TNK1Q13470 666 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 MAPK14Q16539 360 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ATG16L1Q676U5 607 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 CASP12Q6UXS9 341 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ABHD12BQ7Z5M8 362 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 RNF130Q86XS8 419 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 C17orf78Q8N4C9 275 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF75CPQ92670 426 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 MTHFD2LQ9H903 347 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 AIG1Q9NVV5 245 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 THUMPD1Q9NXG2 353 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 P2RX2Q9UBL9 471 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 UPB1Q9UBR1 384 aa12.76□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF469Q96JG9 3925 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 GOLGA8QA0A0J9YX86 632 aa12.75□□□□□ -0.37
SMARCE1-209ENST00000478349 GOLGA8OA6NCC3 632 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms