RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PARGQ86W56 976 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 KLBQ86Z14 1044 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MFSD6LQ8IWD5 586 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 DCUN1D3Q8IWE4 304 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 KCNRGQ8N5I3 272 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 COMMD1Q8N668 190 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TEX19Q8NA77 164 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF527Q8NB42 609 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 RNF149Q8NC42 400 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OR4K2Q8NGD2 314 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OR52N2Q8NGI0 321 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OR5R1Q8NH85 324 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TERB2Q8NHR7 220 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NEIL3Q8TAT5 605 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PIH1D2Q8WWB5 315 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PHYHIPQ92561 330 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NT5C3BQ969T7 300 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM143Q96AN5 459 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MOCOSQ96EN8 888 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 RNFT2Q96EX2 444 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SAT2Q96F10 170 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 HBEGFQ99075 208 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SEPT5Q99719 369 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MESP1Q9BRJ9 268 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GGACTQ9BVM4 153 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SARGQ9BW04 601 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 COLEC11Q9BWP8 271 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MRPL37Q9BZE1 423 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TKTL2Q9H0I9 626 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OR52A5Q9H2C5 316 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 UBQLN3Q9H347 655 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PIF1Q9H611 641 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 B3GAT2Q9NPZ5 323 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MMP26Q9NRE1 261 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 RBM22Q9NW64 420 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 GPATCH2LQ9NWQ4 482 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 FAM120CQ9NX05 1096 aaKnown RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 TAS2R8Q9NYW2 309 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 SLC25A37Q9NYZ2 338 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NUDT4Q9NZJ9 180 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 OR6C2Q9NZP2 312 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NFKBIL1Q9UBC1 381 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-212ENST00000477520 PCTPQ9UKL6 214 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 NEUROG3Q9Y4Z2 214 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 KPTNQ9Y664 436 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 MTCH2Q9Y6C9 303 aa4.36□□□□□ -1.71
PTCD3-212ENST00000477520 LOC105369274A0A096LPK9 316 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 A0A1B0GV90 55 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM72A0PK05 275 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LNP1A1A4G5 178 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR6C68A6NDL8 312 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 BTBD17A6NE02 478 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 F5H5P2 479 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 H7C417 338 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 H7C4K7 107 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GFYI3L273 518 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ACOT7O00154 380 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF593O00488 134 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RFXANKO14593 260 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ITGB1BP1O14713 200 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FGF16O43320 207 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR2T1O43869 369 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ULK1O75385 1050 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GATBO75879 557 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 KCNK5O95279 499 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LATS1O95835 1130 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TIMP1P01033 207 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 VTNP04004 478 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 KLK3P07288 261 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR4E1P0C645 316 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 EBLN1P0CF75 366 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RNF224P0DH78 156 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 COX5BP10606 129 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ACP2P11117 423 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SLC25A4P12235 298 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 BCKDHAP12694 445 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ADRB3P13945 408 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CBR1P16152 277 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PRPS1L1P21108 318 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GSTM3P21266 225 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FBLP22087 321 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GIFP27352 417 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MPGP29372 298 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 DDTP30046 118 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ADRA1AP35348 466 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SOX3P41225 446 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RBM34P42696 430 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RABIFP47224 123 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SRP9P49458 86 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TAF6P49848 677 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CCR4P51679 360 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FOXA1P55317 472 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TAS2R43P59537 309 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TPI1P60174 286 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RAB8AP61006 207 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RPS14P62263 151 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RAP1AP62834 184 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms