RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIM49D1C9J1S8 452 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 KMOO15229 486 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 RAD51BO15315 384 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ATP8B1O43520 1251 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 OR1I1O60431 355 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 NIPSNAP2O75323 286 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 MTX2O75431 263 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 PIAS1O75925 651 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TRIM16O95361 564 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TNFP01375 233 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 MT-ND3P03897 115 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SHBGP04278 402 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 APOA4P06727 396 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 HOXC4P09017 264 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 GPR89BP0CG08 455 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SLC2A2P11168 524 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 CTSEP14091 401 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 STMN1P16949 149 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 RPS3P23396 243 aaKnown RBP eCLIP3.32□□□□□ -1.88
UBR3-209ENST00000477461 PBLDP30039 288 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 TRIM23P36406 574 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 GNPDA1P46926 289 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 PRLHRP49683 370 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 RGS4P49798 205 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SERPINB8P50452 374 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 KPNA2P52292 529 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 LIMK2P53671 638 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 PLOD1Q02809 727 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 OVGP1Q12889 678 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 DNAJC3Q13217 504 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
UBR3-209ENST00000477461 SRSF5Q13243 272 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 CAMK2DQ13557 499 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ZNF74Q16587 644 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TTLL9Q3SXZ7 439 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 CNSTQ6PJW8 725 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TMEM220Q6QAJ8 160 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 MACC1Q6ZN28 852 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 GCNT7Q6ZNI0 430 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 Q6ZSR6 202 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 RAPH1Q70E73 1250 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 OTOAQ7RTW8 1153 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 CCDC91Q7Z6B0 441 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TIGD4Q8IY51 512 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 PIANPQ8IYJ0 282 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ZBTB44Q8NCP5 570 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 OR56A4Q8NGH8 313 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ZNF519Q8TB69 540 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 DCAKDQ8WVC6 231 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SKA2Q8WVK7 121 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 KCNE4Q8WWG9 221 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ANKRD7Q92527 254 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ELMO1Q92556 727 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 GTF3AQ92664 365 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 TMEM159Q96B96 161 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SGF29Q96ES7 293 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 COX14Q96I36 57 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 CABS1Q96KC9 395 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ZIM3Q96PE6 472 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 OR2M4Q96R27 311 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 NDNQ99608 321 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 KLF6Q99612 283 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 NKX3-1Q99801 234 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 TMEM109Q9BVC6 243 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 RAB11FIP5Q9BXF6 653 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 NUSAP1Q9BXS6 441 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 IQCGQ9H095 443 aaKnown RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 VIPAS39Q9H9C1 493 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 SYTL2Q9HCH5 934 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TM9SF3Q9HD45 589 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TAS2R13Q9NYV9 303 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ATXN10Q9UBB4 475 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 GMEB2Q9UKD1 530 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ELF5Q9UKW6 265 aaPredicted RBP3.32□□□□□ -1.88
UBR3-209ENST00000477461 R4GN57 208 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 FANCMQ8IYD8 2048 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 ANKRD12Q6UB98 2062 aa3.32□□□□□ -1.88
UBR3-209ENST00000477461 TNRC6BQ9UPQ9 1833 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 IGLV3-16A0A075B6K0 115 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SPTY2D1-AS1A0A0U1RR47 76 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 MGAT4DA6NG13 374 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 PDZK1P1A8MUH7 402 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 TLR4O00206 839 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SOCS3O14543 225 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 COPEO14579 308 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 LIN7AO14910 233 aaPredicted RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 POP7O75817 140 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 CEACAM4O75871 244 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SOD1P00441 154 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 C1QAP02745 245 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 SLC35G4P0C7Q5 338 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CD59P13987 128 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 IDSP22304 550 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 CRABP2P29373 138 aa3.31□□□□□ -1.88
UBR3-209ENST00000477461 RBMS1P29558 406 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 ARRB1P49407 418 aaPredicted RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 CSNK1EP49674 416 aaKnown RBP3.31□□□□□ -1.88
UBR3-209ENST00000477461 ATXN3P54252 364 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms