RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 GABRG1Q8N1C3 465 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 NINJ1Q92982 152 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF300Q96RE9 604 aaPredicted RBP13.83□□□□□ -0.2
COMMD6-209ENST00000477377 C12orf49Q9H741 205 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 SERINC1Q9NRX5 453 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 CCM2LQ9NUG4 571 aaPredicted RBP13.83□□□□□ -0.2
COMMD6-209ENST00000477377 NDRG3Q9UGV2 375 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 DCTN4Q9UJW0 460 aa13.83□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF443Q9Y2A4 671 aaPredicted RBP13.83□□□□□ -0.2
COMMD6-209ENST00000477377 TMED7-TICAM2A0A0A6YYA0 188 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 A0A1W2PP18 115 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 ZC3H12DA2A288 527 aaKnown RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 CFAP73A6NFT4 308 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 RAMP1O60894 148 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 THBS1P07996 1170 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 PABPC4LP0CB38 370 aaKnown RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 IMPDH2P12268 514 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 GPX2P18283 190 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 TACR3P29371 465 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 SLC7A1P30825 629 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 SLC1A3P43003 542 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 H3F3AP84243 136 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 FADDQ13158 208 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 ADRM1Q16186 407 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 ABLIM2Q6H8Q1 611 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 COMTD1Q86VU5 262 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 SLC43A2Q8N370 569 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 SLC25A43Q8WUT9 341 aaPredicted RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 KLHL4Q9C0H6 718 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 CXXC4Q9H2H0 198 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 THUMPD1Q9NXG2 353 aaKnown RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 CALML5Q9NZT1 146 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 PLEKHA6Q9Y2H5 1048 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 TMED7Q9Y3B3 224 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 PRRC2AP48634 2157 aaKnown RBP13.82□□□□□ -0.2
COMMD6-209ENST00000477377 HIVEP1P15822 2718 aa13.82□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF716A6NP11 495 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF208O43345 1280 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 KLF4O43474 513 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 ATE1O95260 518 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 PGM3O95394 542 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 PMS2P2O95744 297 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 FESP07332 822 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 PSMB1P20618 241 aaKnown RBP13.81□□□□□ -0.2
COMMD6-209ENST00000477377 KCNJ5P48544 419 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 LIN52Q52LA3 116 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 RUNDC3AQ59EK9 446 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 PRAMEF8Q5VWM4 474 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 PRAMEF7Q5VXH5 474 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 MTDHQ86UE4 582 aaKnown RBP13.81□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
COMMD6-209ENST00000477377 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 HDGFL3Q9Y3E1 203 aa13.81□□□□□ -0.2
COMMD6-209ENST00000477377 IGKV3D-15A0A087WSY6 115 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF724A8MTY0 619 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 SULT2B1O00204 365 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 ARAFP10398 606 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CCNA2P20248 432 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 HTR3AP46098 478 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CLK1P49759 484 aaKnown RBP13.8□□□□□ -0.2
COMMD6-209ENST00000477377 POLR2HP52434 150 aaKnown RBP13.8□□□□□ -0.2
COMMD6-209ENST00000477377 RASGEF1BQ0VAM2 473 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 PDK3Q15120 406 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 TSC22D1Q15714 1073 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 PAMR1Q6UXH9 720 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 SERPINA11Q86U17 422 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CXorf67Q86X51 503 aaPredicted RBP13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CCDC103Q8IW40 242 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 DPP10Q8N608 796 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 REXO5Q96IC2 774 aaKnown RBP13.8□□□□□ -0.2
COMMD6-209ENST00000477377 FOXC2Q99958 501 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CPPED1Q9BRF8 314 aaPredicted RBP13.8□□□□□ -0.2
COMMD6-209ENST00000477377 MED18Q9BUE0 208 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 KLHL9Q9P2J3 617 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 PRSS50Q9UI38 385 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 TRAPPC4Q9Y296 219 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 GPR52Q9Y2T5 361 aa13.8□□□□□ -0.2
COMMD6-209ENST00000477377 CASKO14936 926 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 TPST1O60507 370 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 FKBP2P26885 142 aaKnown RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 OR3A2P47893 321 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 ART1P52961 327 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 CSNK2A1P68400 391 aaPredicted RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 HOXC5Q00444 222 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 SELPLGQ14242 412 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 GNA13Q14344 377 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 SFRP5Q5T4F7 317 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 SEZ6L2Q6UXD5 910 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF440Q8IYI8 595 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms