RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CUTCQ9NTM9 273 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 LUZP4Q9P127 313 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 PRELID3BQ9Y3B1 194 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 IGKV6D-21A0A0A0MT36 114 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EMC8O43402 210 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 DUSP11O75319 330 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 HTR3BO95264 441 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 STATHP02808 62 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 HLA-DQB2P05538 268 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 TAP2Q03519 686 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 TLE1Q04724 770 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 GK2Q14410 553 aaPredicted RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 RAET1LQ5VY80 246 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SGK3Q96BR1 496 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 RSPRY1Q96DX4 576 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 PLEKHB1Q9UF11 243 aaPredicted RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SLC6A5Q9Y345 797 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 RDH16O75452 317 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SEMG1P04279 462 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 GDI1P31150 447 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 NPBWR1P48145 328 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 F2RL1P55085 397 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 ERVPABLB-1P60509 514 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EEF1A1P68104 462 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 FKBP1BP68106 108 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 MRPS10P82664 201 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EOGTQ5NDL2 527 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EEF1A1P5Q5VTE0 462 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 FRMPD2BQ6IN97 320 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 FBXL22Q6P050 247 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF600Q6ZNG1 722 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 LANCL3Q6ZV70 420 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 MAMDC2Q7Z304 686 aaPredicted RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 TMEM150AQ86TG1 271 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SLC25A46Q96AG3 418 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 TRMT2BQ96GJ1 504 aaKnown RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SEC22CQ9BRL7 303 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF436Q9C0F3 470 aaPredicted RBP10.8□□□□□ -0.68
U2AF1-209ENST00000475639 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
U2AF1-209ENST00000475639 EDDM13A0A1B0GTR0 161 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 DVL2O14641 736 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SCGB1D1O95968 90 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 EPHA1P21709 976 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 HNF1BP35680 557 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 AGFG1P52594 562 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SLC14A1Q13336 389 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 GRIN2CQ14957 1233 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 NKPD1Q17RQ9 610 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 AWAT2Q6E213 333 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SHFQ7M4L6 423 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR9A2Q8NGT5 310 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 WDR20Q8TBZ3 569 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 LRIG1Q96JA1 1093 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 REG4Q9BYZ8 158 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SLC25A31Q9H0C2 315 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ASB4Q9Y574 426 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 DIDO1Q9BTC0 2240 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 A0A1W2PRU2 124 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 A6NCN8 305 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 H7BY64 318 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 RHCEP18577 417 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 PTNP21246 168 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 TSFMP43897 325 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ARL16Q0P5N6 197 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 MSMO1Q15800 293 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA0895LQ68EN5 471 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 Q6ZVU0 165 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 KRTCAP2Q8N6L1 136 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 DBF4BQ8NFT6 615 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR2A12Q8NGT7 310 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 GPR150Q8NGU9 434 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 PRAP1Q96NZ9 151 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 LMF1Q96S06 567 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CPPED1Q9BRF8 314 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CDCP1Q9H5V8 836 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 DNAJB11Q9UBS4 358 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 TP53BP1Q12888 1972 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF736B4DX44 427 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 BEST1O76090 585 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CLDN7O95471 211 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 C1QCP02747 245 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SCG5P05408 212 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 UBBP0CG47 229 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 UBCP0CG48 685 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR12D1P0DN82 309 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 RAB3AP20336 220 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SNCAP37840 140 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 HAAOP46952 286 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 FAM110CQ1W6H9 321 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 LGALSLQ3ZCW2 172 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR52W1Q6IF63 320 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 NUP43Q8NFH3 380 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 LMX1AQ8TE12 382 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 RBMXL1Q96E39 390 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 PDXPQ96GD0 296 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 NELL2Q99435 816 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms