RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SNX18Q96RF0 628 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 TREX1Q9NSU2 369 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ANKRD34BA5PLL1 514 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 SOCS6O14544 535 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 AIFM1O95831 613 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 IGHG1P01857 330 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 GJA4P35212 333 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 IDH3GP51553 393 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 CYCSP99999 105 aaKnown RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 DCAF12Q5T6F0 453 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 MEPCEQ7L2J0 689 aaKnown RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 LHX3Q9UBR4 397 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 PIGBOS1A0A0B4J2F0 54 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 MYOGP15173 224 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 HTR5AP47898 357 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 VEZF1Q14119 521 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 GK2Q14410 553 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 SNAPC3Q92966 411 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 RSPRY1Q96DX4 576 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 USP22Q9UPT9 525 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 DNAJC13O75165 2243 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 MBLAC1A4D2B0 266 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 TRAPPC2LH3BP13 241 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 BET1O15155 118 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 PENKP01210 267 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 CDK1P06493 297 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 RAB5BP61020 215 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 SELPLGQ14242 412 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 CNN3Q15417 329 aaKnown RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 OR6F1Q8NGZ6 308 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 CALHM2Q9HA72 323 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ATPIF1Q9UII2 106 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 SRPK3Q9UPE1 567 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 MRPL33O75394 65 aaKnown RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 F3P13726 295 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 HTR3AP46098 478 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 GSCP56915 257 aaPredicted RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 ARHGAP19Q14CB8 494 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 ZNF585AQ6P3V2 769 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 NIPAL3Q6P499 406 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 MKXQ8IYA7 352 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 TMEM185AQ8NFB2 350 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 EHFQ9NZC4 300 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 TRBV4-1A0A0J9YWV2 114 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 SSX4O60224 188 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 PRKRAO75569 313 aaKnown RBP10.24□□□□□ -0.77
VAPB-204ENST00000475243 CD46P15529 392 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 LSAMPQ13449 338 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 OR2A12Q8NGT7 310 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 PSMF1Q92530 271 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 HLA-CQ95604 372 aa10.24□□□□□ -0.77
VAPB-204ENST00000475243 A0A087WUU8 490 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 PRAMEF27A3QJZ7 478 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CEBPZOSA8MTT3 80 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TUSC2O75896 110 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 LPLP06858 475 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ARAFP10398 606 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 MAOAP21397 527 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CLDN17P56750 224 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SIRPAP78324 504 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 BATFQ16520 125 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 PRAMEF9Q5VWM5 478 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ADGRG5Q8IZF4 528 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CPXM2Q8N436 756 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 FNDC9Q8TBE3 224 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 CLMPQ9H6B4 373 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 DHCR7Q9UBM7 475 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 EMCNQ9ULC0 261 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TSSK4Q6SA08 328 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 Q6ZPB1 254 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 TPRA1Q86W33 373 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ACOT11Q8WXI4 607 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 SAT2Q96F10 170 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 SUCNR1Q9BXA5 334 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TSPAN11A1L157 253 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SIGLEC6O43699 453 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 GPR75O95800 540 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ALDOCP09972 364 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 SLC14A1Q13336 389 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 GK3PQ14409 553 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 TAAR8Q969N4 342 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 ANKRD60Q9BZ19 345 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 HIF1ANQ9NWT6 349 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 POU4F3Q15319 338 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CYP4V2Q6ZWL3 525 aaPredicted RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 DDX60Q8IY21 1712 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 MUCL1Q96DR8 90 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 SLC6A20Q9NP91 592 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 EMC3Q9P0I2 261 aa10.23□□□□□ -0.77
VAPB-204ENST00000475243 CNOT11Q9UKZ1 510 aaKnown RBP10.23□□□□□ -0.77
VAPB-204ENST00000475243 BOKQ9UMX3 212 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms