RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 VAPBO95292 243 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PGLSO95336 258 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SIX3O95343 332 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TGDSO95455 350 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 WDPCPO95876 746 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PENKP01210 267 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TRBC1P01850 177 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CA3P07451 260 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CTSLP07711 333 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINF2P08697 491 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TROVE2P10155 538 aaKnown RBP eCLIP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PRKAR1AP10644 381 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC2A3P11169 496 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MBL2P11226 248 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RALBP11234 206 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CD1DP15813 335 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 EPORP19235 508 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 AOC1P19801 751 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HLA-DPA1P20036 260 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OGNP20774 298 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SAT1P21673 171 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CALB2P22676 271 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PRDX3P30048 256 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR1E1P30953 314 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CA8P35219 290 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CTNNB1P35222 781 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SPRP35270 261 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ATP5C1P36542 298 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MNDAP41218 407 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC1A6P48664 564 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NPY2RP49146 381 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TUFMP49411 452 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ERFP50548 548 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CCNHP51946 323 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 STC1P52823 247 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 METAP1P53582 386 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CDH13P55290 713 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FOXA1P55317 472 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 YBEYP58557 167 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 C1QTNF8P60827 252 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ABCE1P61221 599 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RHOAP61586 193 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SLC7A9P82251 487 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SARNPP82979 210 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SMARCB1Q12824 385 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RALGDSQ12967 914 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CDH18Q13634 790 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PRPSAP1Q14558 356 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TOMM20Q15388 145 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TSNQ15631 228 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF74Q16587 644 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NTRK2Q16620 822 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PPP1R3AQ16821 1122 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 C18orf21Q32NC0 220 aaPredicted RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 UNC50Q53HI1 259 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ACSBG2Q5FVE4 666 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 HECTD3Q5T447 861 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MARC1Q5VT66 337 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM211Q6ICI0 200 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FAM45BPQ6NSW5 357 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 UGT3A1Q6NUS8 523 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NEPROQ6NW34 567 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 C22orf39Q6P5X5 142 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 AFTPHQ6ULP2 937 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 EPGNQ6UW88 154 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 C16orf54Q6UWD8 224 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SBSNQ6UWP8 590 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MBOAT1Q6ZNC8 495 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TPGS1Q6ZTW0 290 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CYS1Q717R9 158 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 GLT6D1Q7Z4J2 308 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 LINC00523Q86TU6 105 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINA9Q86WD7 417 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 RNF130Q86XS8 419 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CRLF3Q8IUI8 442 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NUDCD3Q8IVD9 361 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MFN1Q8IWA4 741 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR4N5Q8IXE1 308 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CPNE9Q8IYJ1 553 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 GPR65Q8IYL9 337 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CMTM8Q8IZV2 173 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CARNMT1Q8N4J0 409 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OTUD6BQ8N6M0 293 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TEX9Q8N6V9 391 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 TDRD5Q8NAT2 981 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 SIDT2Q8NBJ9 832 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 NPEPL1Q8NDH3 523 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR11H4Q8NGC9 324 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR4K2Q8NGD2 314 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 OR9I1Q8NGQ6 314 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 MOSPD2Q8NHP6 518 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF461Q8TAF7 563 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ITFG1Q8TB96 612 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FAM110BQ8TC76 370 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 FAM45AQ8TCE6 357 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CD200R1Q8TD46 325 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 ACMSDQ8TDX5 336 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PDCD6IPQ8WUM4 868 aaKnown RBP1.24□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC107Q8WV48 283 aa1.24□□□□□ -2.21
CCDC39-203ENST00000473854 PIH1D2Q8WWB5 315 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms