RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 HNRNPCL3B7ZW38 293 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 HNRNPCL1O60812 293 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 HNRNPCL4P0DMR1 293 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 KLK2P20151 261 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 PSMB1P20618 241 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 CLK1P49759 484 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 POLR2HP52434 150 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 RPS26P11Q5JNZ5 115 aaPredicted RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 ZHX1-C8orf76Q96EF9 292 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 PIK3IP1Q96FE7 263 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 OR10A4Q9H209 315 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 CXXC4Q9H2H0 198 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 CACYBPQ9HB71 228 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 SLC52A3Q9NQ40 469 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 RLIMQ9NVW2 624 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 ING1Q9UK53 422 aaPredicted RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 ZNF443Q9Y2A4 671 aaPredicted RBP20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 GPR52Q9Y2T5 361 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 HIVEP1P15822 2718 aa20.05■□□□□ 0.8
PTP4A1-203ENST00000473334 TMED7-TICAM2A0A0A6YYA0 188 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 PMS2P2O95744 297 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 THBS1P07996 1170 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 BMP2P12643 396 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 SLC1A3P43003 542 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 KEAP1Q14145 624 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 LARS2Q15031 903 aaKnown RBP20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 ZSWIM7Q19AV6 140 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 AGKQ53H12 422 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 RNF220Q5VTB9 566 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 ABLIM2Q6H8Q1 611 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 C22orf34Q6ZV56 151 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 MBD6Q96DN6 1003 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 ARL5BQ96KC2 179 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 OR11A1Q9GZK7 315 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 A4GALTQ9NPC4 353 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 SLC25A37Q9NYZ2 338 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 OSGIN1Q9UJX0 560 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 PRDM4Q9UKN5 801 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 TMED7Q9Y3B3 224 aa20.04■□□□□ 0.8
PTP4A1-203ENST00000473334 ZNF724A8MTY0 619 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 DNPH1O43598 174 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 GCM2O75603 506 aaPredicted RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 ATE1O95260 518 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 THBDP07204 575 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 NUDT7P0C024 238 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 CCNA2P20248 432 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 PPIBP23284 216 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 TACR3P29371 465 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 PAGE3Q5JUK9 113 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 PRAMEF8Q5VWM4 474 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 PRAMEF7Q5VXH5 474 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 MTDHQ86UE4 582 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 CXorf67Q86X51 503 aaPredicted RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 MSRB3Q8IXL7 192 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 GABRG1Q8N1C3 465 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 DDIT4LQ96D03 193 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 THOC1Q96FV9 657 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 ZNF300Q96RE9 604 aaPredicted RBP20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 ACTR6Q9GZN1 396 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 RABEP2Q9H5N1 569 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 ZNF232Q9UNY5 417 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 IFT52Q9Y366 437 aa20.03■□□□□ 0.8
PTP4A1-203ENST00000473334 FREM1Q5H8C1 2179 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 TEP1Q99973 2627 aaKnown RBP20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 TMEM72A0PK05 275 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 ZNF208O43345 1280 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 EDF1O60869 148 aaKnown RBP20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 GKN3PP0CG01 181 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 STEAP2Q8NFT2 490 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 BBS10Q8TAM1 723 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 MAL2Q969L2 176 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 DNAJA3Q96EY1 480 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 ALPK1Q96QP1 1244 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 SPATA9Q9BWV2 254 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 HDHD5Q9BXW7 423 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 ARMC7Q9H6L4 198 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 BCL2L10Q9HD36 194 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 EMC3Q9P0I2 261 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 VAPAQ9P0L0 249 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 SLAMF8Q9P0V8 285 aa20.02■□□□□ 0.8
PTP4A1-203ENST00000473334 NCF2P19878 526 aaPredicted RBP20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 ACAA2P42765 397 aaKnown RBP20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 OR3A2P47893 321 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 MAP2K6P52564 334 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 PDK3Q15120 406 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 CLIP4Q8N3C7 705 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 PIGXQ8TBF5 258 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 SIKE1Q9BRV8 207 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 ADAM19Q9H013 955 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 NPHS2Q9NP85 383 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 TMEM181Q9P2C4 612 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 DCTN4Q9UJW0 460 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 TRIM33Q9UPN9 1127 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 TRAPPC4Q9Y296 219 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 GMEB1Q9Y692 573 aa20.01■□□□□ 0.79
PTP4A1-203ENST00000473334 IGKV3D-15A0A087WSY6 115 aa20■□□□□ 0.79
PTP4A1-203ENST00000473334 TRBV5-3A0A0A0MS03 114 aa20■□□□□ 0.79
PTP4A1-203ENST00000473334 A0A1W2PP18 115 aa20■□□□□ 0.79
PTP4A1-203ENST00000473334 C5orf58C9J3I9 102 aa20■□□□□ 0.79
PTP4A1-203ENST00000473334 ARAFP10398 606 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms