RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DAP3P51398 398 aaKnown RBP3.61□□□□□ -1.83
CLK1-209ENST00000472679 HNRNPA3P51991 378 aaKnown RBP3.61□□□□□ -1.83
CLK1-209ENST00000472679 HSD17B7P56937 341 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 PRPS1P60891 318 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 ARL6IP1Q15041 203 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 NSUN5P1Q3KNT7 163 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 SLC25A52Q3SY17 297 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 C1orf146Q5VVC0 180 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 Q6P435 159 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 RFLNAQ6ZTI6 216 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 MOB3BQ86TA1 216 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 OR2T34Q8NGX1 318 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 PELI1Q96FA3 418 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 FARSBQ9NSD9 589 aaKnown RBP3.61□□□□□ -1.83
CLK1-209ENST00000472679 AATFQ9NY61 560 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLK1-209ENST00000472679 TMOD2Q9NZR1 351 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 TBK1Q9UHD2 729 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 PHF11Q9UIL8 331 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 NEUROG3Q9Y4Z2 214 aa3.61□□□□□ -1.83
CLK1-209ENST00000472679 NACAE9PAV3 2078 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 A0A1B0GUA9 196 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 BICDL2A1A5D9 508 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 HELTA6NFD8 242 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 XPO1O14980 1071 aaKnown RBP3.6□□□□□ -1.83
CLK1-209ENST00000472679 CXCL13O43927 109 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 OR10H3O60404 316 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 INSP01308 110 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 ATP6V1B2P21281 511 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 MMP11P24347 488 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 RPS10P46783 165 aaKnown RBP3.6□□□□□ -1.83
CLK1-209ENST00000472679 RGS4P49798 205 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 KLK7P49862 253 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 TGFBR3Q03167 851 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 ELP6Q0PNE2 266 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 UNC119Q13432 240 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 MPPED2Q15777 294 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 TATDN3Q17R31 274 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 SLC36A3Q495N2 470 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 CES3Q6UWW8 571 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 RNF165Q6ZSG1 346 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 ENTHD1Q8IYW4 607 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 C6orf223Q8N319 242 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 NKAPP1Q8N9T2 125 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 FAM151AQ8WW52 585 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 CTNNBL1Q8WYA6 563 aaPredicted RBP3.6□□□□□ -1.83
CLK1-209ENST00000472679 ST8SIA1Q92185 356 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 MRPS31Q92665 395 aaKnown RBP3.6□□□□□ -1.83
CLK1-209ENST00000472679 TSG101Q99816 390 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 OMDQ99983 421 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 NUDT15Q9NV35 164 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 CACNG2Q9Y698 323 aa3.6□□□□□ -1.83
CLK1-209ENST00000472679 IGHV3OR16-13A0A075B7E8 117 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 LRP5LA4QPB2 252 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 RTL8CO15255 209 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 TAPBPO15533 448 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 PEX11AO75192 247 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 CA11O75493 328 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 KRT8P05787 483 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 HSPA5P11021 654 aaKnown RBP3.59□□□□□ -1.83
CLK1-209ENST00000472679 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
CLK1-209ENST00000472679 NADK2Q4G0N4 442 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 TPGS2Q68CL5 300 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 TIFABQ6ZNK6 161 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 CLEC4FQ8N1N0 589 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 OR2L13Q8N349 312 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 Q8N9L7 120 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 OR1F12Q8NHA8 337 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 RAB7BQ96AH8 199 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 SH3YL1Q96HL8 342 aaPredicted RBP3.59□□□□□ -1.83
CLK1-209ENST00000472679 C7orf34Q96L11 122 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 NIPSNAP3BQ9BS92 247 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 ALG12Q9BV10 488 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 RAB18Q9NP72 206 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 MTRF1LQ9UGC7 380 aaKnown RBP3.59□□□□□ -1.83
CLK1-209ENST00000472679 SLCO1B1Q9Y6L6 691 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 KDRP35968 1356 aa3.59□□□□□ -1.83
CLK1-209ENST00000472679 TRDCB7Z8K6 153 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 KRTAP4-16G5E9R7 235 aaPredicted RBP3.58□□□□□ -1.84
CLK1-209ENST00000472679 DCTN6O00399 190 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 IDH1O75874 414 aaKnown RBP3.58□□□□□ -1.84
CLK1-209ENST00000472679 ADCY5O95622 1261 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 IGHV4-34P06331 123 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 HTR1FP30939 366 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 YWHABP31946 246 aaKnown RBP3.58□□□□□ -1.84
CLK1-209ENST00000472679 ZNF763Q0D2J5 394 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 EIF4EBP2Q13542 120 aaPredicted RBP3.58□□□□□ -1.84
CLK1-209ENST00000472679 ARFRP1Q13795 201 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 C10orf120Q5SQS8 335 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 CASC10Q5T4H9 136 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 SYT10Q6XYQ8 523 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 PNKDQ8N490 385 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 BRSK1Q8TDC3 778 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
CLK1-209ENST00000472679 FGF11Q92914 225 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 UCN3Q969E3 161 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 TBC1D31Q96DN5 1066 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 RAB33BQ9H082 229 aa3.58□□□□□ -1.84
CLK1-209ENST00000472679 POPDC2Q9HBU9 364 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms