RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 UPB1Q9UBR1 384 aa8.85□□□□□ -0.99
SCAMP3-205ENST00000472397 KCNS2Q9ULS6 477 aa8.85□□□□□ -0.99
SCAMP3-205ENST00000472397 NUP214P35658 2090 aaPredicted RBP8.85□□□□□ -0.99
SCAMP3-205ENST00000472397 MALRD1Q5VYJ5 2156 aa8.85□□□□□ -0.99
SCAMP3-205ENST00000472397 RNF103-CHMP3A0A140T963 221 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 TLDC2A0PJX2 215 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ZNF724A8MTY0 619 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 KIF2AO00139 706 aaPredicted RBP8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 NR5A2O00482 541 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 EIF4E2O60573 245 aaKnown RBP8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SPAG7O75391 227 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 MRPL33O75394 65 aaKnown RBP8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 CHEK2O96017 543 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 TGFAP01135 160 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 IFI6P09912 130 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 OR12D1P0DN82 309 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 APEHP13798 732 aaKnown RBP8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ALDH3A1P30838 453 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 IL2RGP31785 369 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ASMTP46597 345 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 PDLIM4P50479 330 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 EFNA4P52798 201 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 DSCR9P59020 149 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 HBA1P69905 142 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SKP2Q13309 424 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 MST1LQ2TV78 715 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 UGT3A2Q3SY77 523 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SLC25A53Q5H9E4 307 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 TSPO2Q5TGU0 170 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 OR4F3Q6IEY1 312 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 R3HCC1LQ7Z5L2 792 aaKnown RBP8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 OR56A1Q8NGH5 318 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 XAGE5Q8WWM1 108 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SLC35G5Q96KT7 338 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 LAT2Q9GZY6 243 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SEC61A2Q9H9S3 476 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 GP6Q9HCN6 339 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ACER3Q9NUN7 267 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ASB6Q9NWX5 421 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 SLC17A7Q9P2U7 560 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 ACTL7BQ9Y614 415 aa8.84□□□□□ -0.99
SCAMP3-205ENST00000472397 TMEM72A0PK05 275 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 SH3PXD2BA1X283 911 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 ZC3H12DA2A288 527 aaKnown RBP8.83□□□□□ -1
SCAMP3-205ENST00000472397 LYNX1G3V0Z9 82 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 LYNX1P0DP58 116 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 G6PDP11413 515 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 IMPDH2P12268 514 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 KRT4P19013 534 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 PGCP20142 388 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 PTAFRP25105 342 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 LCN1P31025 176 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 ARRB2P32121 409 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 CRHR1P34998 444 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 NR4A2P43354 598 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 CCT5P48643 541 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 IDH2P48735 452 aaKnown RBP8.83□□□□□ -1
SCAMP3-205ENST00000472397 CHRNB3Q05901 458 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 CR1LQ2VPA4 569 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 CCDC153Q494R4 210 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 ATP6AP1LQ52LC2 224 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 FAM166AQ6J272 317 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 C16orf62Q7Z3J2 963 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 SLC46A3Q7Z3Q1 461 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 LCA5Q86VQ0 697 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 ADGRG3Q86Y34 549 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 IFT20Q8IY31 132 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 FNDC5Q8NAU1 212 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 CNOT9Q92600 299 aaKnown RBP8.83□□□□□ -1
SCAMP3-205ENST00000472397 TRMOQ9BU70 441 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 DUSP26Q9BV47 211 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 TXLNGYQ9BZA5 131 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 SLC17A5Q9NRA2 495 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 TAS2R16Q9NYV7 291 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 EMC3Q9P0I2 261 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 LPAR3Q9UBY5 353 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 PMF1-BGLAPU3KQ54 211 aa8.83□□□□□ -1
SCAMP3-205ENST00000472397 PLCE1Q9P212 2302 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 A0A096LPE4 126 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 TMED7-TICAM2A0A0A6YYA0 188 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 A0A1W2PPZ6 126 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 H7C417 338 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 TRIM13O60858 407 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 STX11O75558 287 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 LYPLA1O75608 230 aaPredicted RBP8.82□□□□□ -1
SCAMP3-205ENST00000472397 AKR7A3O95154 331 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 HSPA4LO95757 839 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 LGI1O95970 557 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 NEFHP12036 1026 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 ITGA2P17301 1181 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 APOBEC3AP31941 199 aaPredicted RBP8.82□□□□□ -1
SCAMP3-205ENST00000472397 PGM1P36871 562 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 GZMKP49863 264 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 NME5P56597 212 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 CSNK2A1P68400 391 aaPredicted RBP8.82□□□□□ -1
SCAMP3-205ENST00000472397 PHC1P78364 1004 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 PLAURQ03405 335 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 BNIP2Q12982 314 aa8.82□□□□□ -1
SCAMP3-205ENST00000472397 LSM12Q3MHD2 195 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms