RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 FPR3P25089 353 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 FKBP2P26885 142 aaKnown RBP17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 DPP4P27487 766 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 GSSP48637 474 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 MERTKQ12866 999 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 FOXF1Q12946 379 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 LRRC36Q1X8D7 754 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 RFX4Q33E94 735 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 ZNF730Q6ZMV8 503 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 TMPRSS11FQ6ZWK6 438 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 GALNTL5Q7Z4T8 443 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 ZADH2Q8N4Q0 377 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 OR9Q2Q8NGE9 314 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 OR6S1Q8NH40 331 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 PIGXQ8TBF5 258 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 STK35Q8TDR2 534 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 LIPHQ8WWY8 451 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 MEPEQ9NQ76 525 aaPredicted RBP17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 TUBD1Q9UJT1 453 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 MED31Q9Y3C7 131 aa17.6■□□□□ 0.41
CHMP2B-204ENST00000472024 TMED7-TICAM2A0A0A6YYA0 188 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 ELOA3DA6NLF2 546 aaPredicted RBP17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 OR10H3O60404 316 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 WISP1O95388 367 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 GASTP01350 101 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 CD97P48960 835 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 MEOX1P50221 254 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 B3GALT5-AS1P59052 145 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 GPR85P60893 370 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 LSM11P83369 360 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 EGR4Q05215 589 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 COX10Q12887 443 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 ELOA3BQ3SY89 546 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 OTUD3Q5T2D3 398 aaPredicted RBP17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 TTC33Q6PID6 262 aaPredicted RBP17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 NRMQ8IXM6 262 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 AQP11Q8NBQ7 271 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 ELOA3Q8NG57 546 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 TTTY12Q9BZ98 90 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 SMURF2Q9HAU4 748 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 KRCC1Q9NPI7 259 aaPredicted RBP17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 B4GALT7Q9UBV7 327 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 TMED7Q9Y3B3 224 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 CSAG2Q9Y5P2 127 aa17.59■□□□□ 0.41
CHMP2B-204ENST00000472024 PDGFAP04085 211 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 RFPL3SP0C7P2 107 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 CXCR1P25024 350 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 CLK1P49759 484 aaKnown RBP17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 TSPAN31Q12999 210 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 ANKRD34AQ69YU3 496 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 ATG16L2Q8NAA4 619 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 GNPDA2Q8TDQ7 276 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 NPAS1Q99742 590 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 GABARAPL3Q9BY60 117 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 PRORYQ9H606 182 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 CHRNA9Q9UGM1 479 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 VDAC3Q9Y277 283 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 POFUT2Q9Y2G5 429 aa17.58■□□□□ 0.4
CHMP2B-204ENST00000472024 TMEM72A0PK05 275 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 A8MVM7 634 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 LINC01387J3KSC0 135 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 EFNA2O43921 213 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 GMFGO60234 142 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 SUSD5O60279 629 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 HK1P19367 917 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 GSTM3P21266 225 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 IGFBP5P24593 272 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 HSPA13P48723 471 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 CXADRP78310 365 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 ALDH6A1Q02252 535 aaKnown RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 SELENBP1Q13228 472 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 KCNAB2Q13303 367 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 INAQ16352 499 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 NHSL2Q5HYW2 709 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 RPUSD3Q6P087 351 aaKnown RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 IZUMO2Q6UXV1 221 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 PRICKLE2Q7Z3G6 844 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 CLDN22Q8N7P3 220 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 MAGEE2Q8TD90 523 aaPredicted RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 SLC25A43Q8WUT9 341 aaPredicted RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 ZNF184Q99676 751 aaPredicted RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 GPA33Q99795 319 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 NIPSNAP1Q9BPW8 284 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 POTEKPQ9BYX7 375 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 ADNPQ9H2P0 1102 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 KLHL1Q9NR64 748 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 SMPD3Q9NY59 655 aaPredicted RBP17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 ENOPH1Q9UHY7 261 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 DKKL1Q9UK85 242 aa17.57■□□□□ 0.4
CHMP2B-204ENST00000472024 CACNA1BQ00975 2339 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 PIP5K1CO60331 668 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 RAD23AP54725 363 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 AQP4P55087 323 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 ZNF169Q14929 603 aaPredicted RBP17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 RRM2BQ7LG56 351 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 GALNT4Q8N4A0 578 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 TMEM251Q8N6I4 163 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 RBMXL3Q8N7X1 1067 aaKnown RBP17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 PFN4Q8NHR9 129 aa17.56■□□□□ 0.4
CHMP2B-204ENST00000472024 EXTL1Q92935 676 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms