RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 SIGLEC8Q9NYZ4 499 aa3.23□□□□□ -1.89
XRN1-207ENST00000468894 GNG12Q9UBI6 72 aa3.23□□□□□ -1.89
XRN1-207ENST00000468894 ERVW-1Q9UQF0 538 aa3.23□□□□□ -1.89
XRN1-207ENST00000468894 TP53TG5Q9Y2B4 290 aa3.23□□□□□ -1.89
XRN1-207ENST00000468894 RRP15Q9Y3B9 282 aaKnown RBP3.23□□□□□ -1.89
XRN1-207ENST00000468894 MFHAS1Q9Y4C4 1052 aa3.23□□□□□ -1.89
XRN1-207ENST00000468894 CPLX1O14810 134 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 SNAI2O43623 268 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 LGI1O95970 557 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 CALCBP10092 127 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 RPS2P15880 293 aaKnown RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 HTR2AP28223 471 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 ANP32AP39687 249 aaKnown RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 KLK7P49862 253 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 LHX2P50458 406 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 CSTF1Q05048 431 aaKnown RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 GPRC6AQ5T6X5 926 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 GRAMD2AQ8IUY3 354 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 MDS2Q8NDY4 140 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 FAM3CQ92520 227 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 SPATA16Q9BXB7 569 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 HOXC10Q9NYD6 342 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 C6orf203Q9P0P8 240 aaPredicted RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 RABL2AQ9UBK7 228 aaPredicted RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 ZNF223Q9UK11 482 aaPredicted RBP3.22□□□□□ -1.89
XRN1-207ENST00000468894 ASF1AQ9Y294 204 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 IKBKGQ9Y6K9 419 aa3.22□□□□□ -1.89
XRN1-207ENST00000468894 ATP10DQ9P241 1426 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ANKRD63C9JTQ0 380 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 E7ESA3 106 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 CLDN3O15551 220 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ZSCAN12O43309 604 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 DFNA5O60443 496 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 MOSP00540 346 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 AK1P00568 194 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 PCCAP05165 728 aaPredicted RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 H2BFMP0C1H6 154 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NT5EP21589 574 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 FGF9P31371 208 aaPredicted RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 CD86P42081 329 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 HNRNPA3P51991 378 aaKnown RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 AP3M2P53677 418 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 LINC00315P59091 139 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NUCB2P80303 420 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ZNF763Q0D2J5 394 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ARL6IP1Q15041 203 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 INAQ16352 499 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NSUN5P1Q3KNT7 163 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 C1orf100Q5SVJ3 147 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ZNF691Q5VV52 312 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 ATL3Q6DD88 541 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 FAM71F2Q6NXP2 309 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 COX15Q7KZN9 410 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 IQCF2Q8IXL9 164 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 CENPLQ8N0S6 344 aaPredicted RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 LRRC43Q8N309 656 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 PNKDQ8N490 385 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 DHRSXQ8N5I4 330 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 FADS6Q8N9I5 356 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 OR51S1Q8NGJ8 323 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 TCTEX1D2Q8WW35 142 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 RAPGEF5Q92565 580 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 STARD4Q96DR4 205 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 RNF185Q96GF1 192 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 OR2M2Q96R28 347 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 CCNL2Q96S94 520 aaPredicted RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 TSG101Q99816 390 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 RASL11BQ9BPW5 248 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NRIP2Q9BQI9 281 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NXF5Q9H1B4 397 aaKnown RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 SMYD3Q9H7B4 428 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 NUDT15Q9NV35 164 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 PRPF19Q9UMS4 504 aaKnown RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 MAD1L1Q9Y6D9 718 aa3.21□□□□□ -1.9
XRN1-207ENST00000468894 MTCL1Q9Y4B5 1905 aaKnown RBP3.21□□□□□ -1.9
XRN1-207ENST00000468894 OR1F1O43749 312 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 OR10H3O60404 316 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 TM7SF2O76062 418 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 UFL1O94874 794 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 ALOX5P09917 674 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 PJVKQ0ZLH3 352 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 MXD4Q14582 209 aaPredicted RBP3.2□□□□□ -1.9
XRN1-207ENST00000468894 SYT10Q6XYQ8 523 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 CLDN19Q8N6F1 224 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 CATSPER1Q8NEC5 780 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 PIGCQ92535 297 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 ITFG2Q969R8 447 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 KCNA7Q96RP8 456 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 GPA33Q99795 319 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 ZNF416Q9BWM5 594 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 DPH5Q9H2P9 285 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 PLGRKTQ9HBL7 147 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 SUN2Q9UH99 717 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 BLOC1S6Q9UL45 172 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 RASD1Q9Y272 281 aa3.2□□□□□ -1.9
XRN1-207ENST00000468894 ZNFX1Q9P2E3 1918 aaKnown RBP3.2□□□□□ -1.9
XRN1-207ENST00000468894 SF3B1O75533 1304 aaKnown RBP eCLIP3.19□□□□□ -1.9
XRN1-207ENST00000468894 SCN2AQ99250 2005 aa3.19□□□□□ -1.9
XRN1-207ENST00000468894 IGKV1D-8A0A087WSZ0 117 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms