RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR14I1A6ND48 311 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 AGAP5A6NIR3 686 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CD22P20273 847 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SLC1A3P43003 542 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 GPNMBQ14956 572 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SLC43A2Q8N370 569 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 ZNF582Q96NG8 517 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CACNG6Q9BXT2 260 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CPNE5Q9HCH3 593 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 FBXO9Q9UK97 447 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 LOC100509620A0A075B734 347 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 GPRIN2O60269 458 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 EIF5AP63241 154 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 POU3F1Q03052 451 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 FAM53BQ14153 422 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 NTRK2Q16620 822 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 RIMKLAQ8IXN7 391 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 DEFB123Q8N688 67 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 GALNT6Q8NCL4 622 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 RNF215Q9Y6U7 377 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 PTHP01270 115 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CAPNS1P04632 268 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SPCS2Q15005 226 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SLC25A25Q6KCM7 469 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 INO80EQ8NBZ0 244 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 AK6Q9Y3D8 172 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 H0YIG0 161 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CDK4P11802 303 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 SELENOVP59797 346 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 MALLQ13021 153 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 FGL2Q14314 439 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 RPL3LQ92901 407 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 UCKL1Q9NWZ5 548 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 PADI1Q9ULC6 663 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 MOKQ9UQ07 419 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 C14orf166Q9Y224 244 aaKnown RBP12.78□□□□□ -0.36
BRAT1-203ENST00000467558 ASB4Q9Y574 426 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
BRAT1-203ENST00000467558 PARP14Q460N5 1801 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.36
BRAT1-203ENST00000467558 A0A087WUU8 490 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 A0A087WV62 115 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 ARHGAP33O14559 1287 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 PSMB10P40306 273 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 AQP2P41181 271 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 SNRPGP62308 76 aaKnown RBP12.77□□□□□ -0.36
BRAT1-203ENST00000467558 FOXK2Q01167 660 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 SRYQ05066 204 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 PRKCDQ05655 676 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 TBRG1Q3YBR2 411 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 HES5Q5TA89 166 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 THOC7Q6I9Y2 204 aaKnown RBP12.77□□□□□ -0.36
BRAT1-203ENST00000467558 SPTSSAQ969W0 71 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 FAM46BQ96A09 425 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 GABARAPL1Q9H0R8 117 aa12.77□□□□□ -0.36
BRAT1-203ENST00000467558 NDRG4Q9ULP0 352 aaKnown RBP12.77□□□□□ -0.36
BRAT1-203ENST00000467558 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-203ENST00000467558 SUSD5O60279 629 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 ALOX12BO75342 701 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 MOSPD3O75425 235 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 JUNBP17275 347 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-203ENST00000467558 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 CRMP1Q14194 572 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 SYT6Q5T7P8 510 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF547Q8IVP9 402 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 CCDC74AQ96AQ1 378 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 COX14Q96I36 57 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 TRAV36DV7A0A075B6V5 113 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 OR2T7P0C7T2 308 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 OR6Q1Q8NGQ2 317 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 OR2T27Q8NH04 317 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 AKAP1Q92667 903 aaKnown RBP eCLIP12.77□□□□□ -0.37
BRAT1-203ENST00000467558 RSPRY1Q96DX4 576 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 GABRG3Q99928 467 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 POMT2Q9UKY4 750 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 GMEB1Q9Y692 573 aa12.77□□□□□ -0.37
BRAT1-203ENST00000467558 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms