RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	TOR1AIP1	Q5JTV8	583 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C3orf33	Q6P1S2	294 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NOTUM	Q6P988	496 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SH2D5	Q6ZV89	423 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC16A9	Q7RTY1	509 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PRUNE1	Q86TP1	453 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ISCA2	Q86U28	154 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	HPS6	Q86YV9	775 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PSTK	Q8IV42	348 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FAM219A	Q8IW50	185 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SYCE1	Q8N0S2	351 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TTC29	Q8NA56	475 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	AGAP11	Q8TF27	550 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NAT14	Q8WUY8	206 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EXT2	Q93063	718 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMIGD2	Q96BF3	282 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MOB3A	Q96BX8	217 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	B3GALT6	Q96L58	329 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MUS81	Q96NY9	551 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PCDHB18P	Q96TA0	734 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	AGPAT1	Q99943	283 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KCNS3	Q9BQ31	491 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RPF1	Q9H9Y2	349 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CYP3A43	Q9HB55	503 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DNAJC4	Q9NNZ3	241 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DDX43	Q9NXZ2	648 aa	Known RBP	4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PKD2L2	Q9NZM6	624 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ACTR3B	Q9P1U1	418 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SNX6	Q9UNH7	406 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	WDR83OS	Q9Y284	106 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LIPG	Q9Y5X9	500 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	POLE	Q07864	2286 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUMA1	Q14980	2115 aa		4.4	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KRT87P	A6NCN2	255 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ATP6V0E1	O15342	81 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PEX11A	O75192	247 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CSDE1	O75534	798 aa	Known RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RECQL5	O94762	991 aa	Predicted RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SEMA3D	O95025	777 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SNAP29	O95721	258 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DHFR	P00374	187 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IGKV3-20	P01619	116 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CSF2	P04141	144 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PAEP	P09466	180 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZCCHC18	P0CG32	403 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CXCL8	P10145	99 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LIPC	P11150	499 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TNNI1	P19237	187 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EEF1B2	P24534	225 aa	Known RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PTBP1	P26599	531 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CHRNB4	P30926	498 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RPL21	P46778	160 aa	Known RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	EIF2B2	P49770	351 aa	Known RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC7A2	P52569	658 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CDH4	P55283	916 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SPCS3	P61009	180 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	IL9R	Q01113	521 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DEFA6	Q01524	100 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CDR2	Q01850	454 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	KRTAP1-1	Q07627	177 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PMS2P3	Q13401	168 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RUNX3	Q13761	415 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SPA17	Q15506	151 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CHRNA6	Q15825	494 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SGCA	Q16586	387 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ODF4	Q2M2E3	257 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C1orf146	Q5VVC0	180 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CLEC6A	Q6EIG7	209 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	METAP1D	Q6UB28	335 aa	Predicted RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PEX26	Q7Z412	305 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	ZNF329	Q86UD4	541 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	VASH2	Q86V25	355 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC47A2	Q86VL8	602 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUDT13	Q86X67	352 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PHF13	Q86YI8	300 aa	Predicted RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	NUDCD3	Q8IVD9	361 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC35F6	Q8N357	371 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TCAIM	Q8N3R3	496 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	LRRC52	Q8N7C0	313 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	BMPER	Q8N8U9	685 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TRPV3	Q8NET8	790 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR5T1	Q8NG75	326 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	OR52N1	Q8NH53	320 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CHPT1	Q8WUD6	406 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	PYDC1	Q8WXC3	89 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	DNAJC9	Q8WXX5	260 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RFT1	Q96AA3	541 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	FBXO17	Q96EF6	278 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	CPB2	Q96IY4	423 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	TMEM237	Q96Q45	408 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SPX	Q9BT56	116 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC25A23	Q9BV35	468 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MRPL37	Q9BZE1	423 aa	Known RBP	4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	SLC22A4	Q9H015	551 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	MCCC2	Q9HCC0	563 aa		4.39	□□□□□ -1.71
CACNA1C-223	ENST00000465278	C19orf12	Q9NSK7	152 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms