RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CAPS2Q9BXY5 557 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 TMEM117Q9H0C3 514 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 NANSQ9NR45 359 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 GLRX2Q9NS18 164 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 SMPD3Q9NY59 655 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-205ENST00000464541 PLLPQ9Y342 182 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 OARD1Q9Y530 152 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CDH10Q9Y6N8 788 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 PLEKHG1Q9ULL1 1385 aa3.86□□□□□ -1.79
PTCD3-205ENST00000464541 CLDN5O00501 218 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 CASC3O15234 703 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 TBX19O60806 448 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 ECI2O75521 394 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 S100A9P06702 114 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 PAICSP22234 425 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 CYP2F1P24903 491 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 PLK1P53350 603 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 SNTB2Q13425 540 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 MPPED2Q15777 294 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 STEAP2Q8NFT2 490 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 CNIH3Q8TBE1 160 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 OR1E3Q8WZA6 343 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 RAPGEF5Q92565 580 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 EBF4Q9BQW3 602 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 ZSCAN5AQ9BUG6 496 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 MRPL13Q9BYD1 178 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 PKIBQ9C010 78 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 MYOZ2Q9NPC6 264 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 UBQLN1Q9UMX0 589 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 CHMP2BQ9UQN3 213 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 IFT52Q9Y366 437 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 MROH5Q6ZUA9 1318 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 WDR19Q8NEZ3 1342 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 KIF16BQ96L93 1317 aa3.85□□□□□ -1.79
PTCD3-205ENST00000464541 EIF4G1Q04637 1599 aaKnown RBP3.85□□□□□ -1.79
PTCD3-205ENST00000464541 PPIAL4CA0A0B4J2A2 164 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 LINC00854A0A1B0GVQ3 168 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 A0A1B0GWB2 263 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 ESYT2A0FGR8 921 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 NCF1BA6NI72 391 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 NCF1CA8MVU1 366 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 PRRG1O14668 218 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 WBP4O75554 376 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 UGT2B17O75795 530 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 OR4F21O95013 312 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 LALBAP00709 142 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 PPIAL4GP0DN37 164 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CD9P21926 228 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CCNE1P24864 410 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CD80P33681 288 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 EPHX2P34913 555 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CCT6AP40227 531 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 BDKRB1P46663 353 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 PRRX1P54821 245 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 NUP107P57740 925 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 MECOMQ03112 1051 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CSTF1Q05048 431 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CHRNB3Q05901 458 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 RAB40BQ12829 278 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 PLD1Q13393 1074 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 HADHQ16836 314 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CCDC152Q4G0S7 254 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 TMEM41BQ5BJD5 291 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 PMF1Q6P1K2 205 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CES3Q6UWW8 571 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 TMEM252Q8N6L7 170 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 Q8N9L7 120 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 DRAXINQ8NBI3 349 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 NANPQ8TBE9 248 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 FBXO32Q969P5 355 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 MYLPFQ96A32 169 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 RBM14Q96PK6 669 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 VCX2Q9H322 139 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 ZNF385DQ9H6B1 395 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 DHX33Q9H6R0 707 aaKnown RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 SUDS3Q9H7L9 328 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-205ENST00000464541 B3GNT2Q9NY97 397 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 SCML2Q9UQR0 700 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 MFHAS1Q9Y4C4 1052 aa3.84□□□□□ -1.79
PTCD3-205ENST00000464541 CHD4Q14839 1912 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 A0A0J9YXY3 114 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 K7N7A8 449 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 SDHDO14521 159 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 CHADO15335 359 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 STX7O15400 261 aaKnown RBP3.83□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF264O43296 627 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 ASNSP08243 561 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 RNH1P13489 461 aaKnown RBP3.83□□□□□ -1.8
PTCD3-205ENST00000464541 RPA2P15927 270 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 AQP1P29972 269 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 ACTR3P61158 418 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 TNFRSF17Q02223 184 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 PDK3Q15120 406 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 DPYSL2Q16555 572 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 PDK4Q16654 411 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 TIGITQ495A1 244 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 AADACL4Q5VUY2 407 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 CBLN3Q6UW01 205 aa3.83□□□□□ -1.8
PTCD3-205ENST00000464541 UNQ9370/PRO34162Q6UXP9 181 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms