RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZNF649Q9BS31 505 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 ACTRT3Q9BYD9 372 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 PLA2G12AQ9BZM1 189 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 UBQLN3Q9H347 655 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 HRASLSQ9HDD0 168 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 CMC2Q9NRP2 79 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MRPL17Q9NRX2 175 aaKnown RBP6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 OR6C2Q9NZP2 312 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 MLXQ9UH92 298 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF780BQ9Y6R6 833 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 ANAPC1Q9H1A4 1944 aa6.66□□□□□ -1.34
CLSTN1-204ENST00000464286 A0A0G2JK05 382 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ANKRD20A5PA0PJZ0 165 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC22A23A1A5C7 686 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2M5A3KFT3 312 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 HSPB2A8KAH6 182 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 PRSS44E7EML9 344 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 H7BY64 318 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ARPC1BO15143 372 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GALR3O60755 368 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ADAMTS4O75173 837 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SEMA7AO75326 666 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 RBBP9O75884 186 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GBAP04062 536 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CKMP06732 381 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 DBIP07108 87 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GALTP07902 379 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 IFI6P09912 130 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SBK2P0C263 348 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ELFN1P0C7U0 828 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CKBP12277 381 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CYBAP13498 195 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 NT5EP21589 574 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 OPRD1P41143 372 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 RBM34P42696 430 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SSR2P43308 183 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CCR6P51684 374 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CAPZA1P52907 286 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC3A1Q07837 685 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 IL10RAQ13651 578 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF345Q14585 488 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TOMM20Q15388 145 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TAF1CQ15572 869 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 HSPB2Q16082 182 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ZNF805Q5CZA5 627 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 PABPC1L2AQ5JQF8 200 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC35D3Q5M8T2 416 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC6A19Q695T7 634 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 VASNQ6EMK4 673 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 OR4C11Q6IEV9 310 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CDPF1Q6NVV7 123 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 PLBD1Q6P4A8 553 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TMPRSS11FQ6ZWK6 438 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 HSD11B1LQ7Z5J1 315 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TECPR1Q7Z6L1 1165 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 KIAA0907Q7Z7F0 614 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TMEM173Q86WV6 379 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TRAPPC5Q8IUR0 188 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 NRMQ8IXM6 262 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TCEAL8Q8IYN2 117 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 OR2L2Q8NH16 312 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 COQ8AQ8NI60 647 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ADAMTS15Q8TE58 950 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 POF1BQ8WVV4 589 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 THAP4Q8WY91 577 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GHSRQ92847 366 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 FBXW5Q969U6 566 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CNN2Q99439 309 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC38A3Q99624 504 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 TCEAL7Q9BRU2 100 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GSDMCQ9BYG8 508 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SLC19A3Q9BZV2 496 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 NKX6-2Q9C056 277 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ARL6Q9H0F7 186 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ALX4Q9H161 411 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 SCPEP1Q9HB40 452 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 HINT3Q9NQE9 182 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 NKIRAS2Q9NYR9 191 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 COMMD9Q9P000 198 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CD84Q9UIB8 345 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 PURGQ9UJV8 347 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 GMEB2Q9UKD1 530 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 RCE1Q9Y256 329 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 MED31Q9Y3C7 131 aa6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 HELZP42694 1942 aaKnown RBP6.65□□□□□ -1.34
CLSTN1-204ENST00000464286 CKAP5Q14008 2032 aa6.65□□□□□ -1.35
CLSTN1-204ENST00000464286 COL4A6Q14031 1691 aa6.65□□□□□ -1.35
CLSTN1-204ENST00000464286 A0A0A6YYD5 115 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 SHISA3A0PJX4 238 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 MYADML2A6NDP7 307 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 ACOD1A6NK06 481 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 RFPL4AA6NLU0 287 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 CPSF4LA6NMK7 179 aaKnown RBP6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 GPR89AB7ZAQ6 455 aa6.64□□□□□ -1.35
CLSTN1-204ENST00000464286 MCIDASD6RGH6 385 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms