RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 WDR31Q8NA23 367 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 PIGXQ8TBF5 258 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 ZHX1-C8orf76Q96EF9 292 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 ARL5BQ96KC2 179 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 CCDC106Q9BWC9 280 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 C1QTNF6Q9BXI9 259 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 SERHL2Q9H4I8 314 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 MID2Q9UJV3 735 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 SPIN1Q9Y657 262 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-209ENST00000463244 PMF1-BGLAPU3KQ54 211 aa18.19■□□□□ 0.5
CPSF7-209ENST00000463244 DUXAA6NLW8 204 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 HAX1O00165 279 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 PEX11AO75192 247 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 STX11O75558 287 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 LY6HO94772 140 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 AK1P00568 194 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 TFPIP10646 304 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 APOBEC3AP31941 199 aaPredicted RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 APOBEC1P41238 236 aaKnown RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 HBA1P69905 142 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 SRSF2Q01130 221 aaKnown RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 XKR7Q5GH72 579 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 FAM166AQ6J272 317 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 EIF3MQ7L2H7 374 aaKnown RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 RIMKLAQ8IXN7 391 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 FAM71CQ8NEG0 241 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 PRPF18Q99633 342 aaKnown RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 C1orf50Q9BV19 199 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 BHLHE41Q9C0J9 482 aaPredicted RBP18.18■□□□□ 0.5
CPSF7-209ENST00000463244 FKRPQ9H9S5 495 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 CTPS2Q9NRF8 586 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 CHRNA9Q9UGM1 479 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 MKLN1Q9UL63 735 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 KCNS2Q9ULS6 477 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 HDGFL3Q9Y3E1 203 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 ATP23Q9Y6H3 246 aa18.18■□□□□ 0.5
CPSF7-209ENST00000463244 SLC35F4A4IF30 521 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 VWC2LB2RUY7 222 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 ANKRD28O15084 1053 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 CFLARO15519 480 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 DNPH1O43598 174 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 KRT4P19013 534 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 MATN1P21941 496 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 ARHGAP11BQ3KRB8 267 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 ATP6AP1LQ52LC2 224 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 OLIG3Q7RTU3 272 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 CCDC103Q8IW40 242 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 OR52E4Q8NGH9 312 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 DNAJA3Q96EY1 480 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 DUSP26Q9BV47 211 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 ZNF350Q9GZX5 532 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 CHODLQ9H9P2 273 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 DCTN4Q9UJW0 460 aa18.17■□□□□ 0.5
CPSF7-209ENST00000463244 SHBGP04278 402 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 PRPS1L1P21108 318 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 SOAT1P35610 550 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 PGM1P36871 562 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 PHC1P78364 1004 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 SLC25A3Q00325 362 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 MAPK14Q16539 360 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C6orf136Q5SQH8 315 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 FAM120AOSQ5T036 256 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 IL17RELQ6ZVW7 336 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C6orf120Q7Z4R8 191 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C4orf33Q8N1A6 199 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C17orf78Q8N4C9 275 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C1orf162Q8NEQ5 155 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-209ENST00000463244 C3orf30Q96M34 536 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 OR11A1Q9GZK7 315 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 SLC17A5Q9NRA2 495 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 AMDHD2Q9Y303 409 aa18.16■□□□□ 0.5
CPSF7-209ENST00000463244 NDUFS8O00217 210 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 NPHS1O60500 1241 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 BCAS1O75363 584 aaPredicted RBP18.15■□□□□ 0.5
CPSF7-209ENST00000463244 FKBP2P26885 142 aaKnown RBP18.15■□□□□ 0.5
CPSF7-209ENST00000463244 MAGEA8P43361 318 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 CLK1P49759 484 aaKnown RBP18.15■□□□□ 0.5
CPSF7-209ENST00000463244 PDLIM4P50479 330 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 H3F3AP84243 136 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 GGTLC2Q14390 218 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 SWI5Q1ZZU3 235 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 C9orf135Q5VTT2 229 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 IL23RQ5VWK5 629 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 CASP12Q6UXS9 341 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 GRINAQ7Z429 371 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 FNDC5Q8NAU1 212 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 ZNF563Q8TA94 476 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 OIT3Q8WWZ8 545 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 MSI2Q96DH6 328 aaKnown RBP18.15■□□□□ 0.5
CPSF7-209ENST00000463244 PRR14Q9BWN1 585 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 SLC35A3Q9Y2D2 325 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 TENM1Q9UKZ4 2725 aa18.15■□□□□ 0.5
CPSF7-209ENST00000463244 LOC100289279A0A1B0GTE1 492 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 ATP6V1G2-DDX39BF2Z307 99 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 KIAA0513O60268 411 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 SLU7O95391 586 aaKnown RBP18.14■□□□□ 0.49
CPSF7-209ENST00000463244 NR4A2P43354 598 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 MST1LQ2TV78 715 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 C16orf62Q7Z3J2 963 aa18.14■□□□□ 0.49
CPSF7-209ENST00000463244 ADGRG3Q86Y34 549 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms