RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GABARAPL1Q9H0R8 117 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 ACKR4Q9NPB9 350 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 STOML1Q9UBI4 398 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 TMED7Q9Y3B3 224 aa12.97□□□□□ -0.33
COL6A1-202ENST00000463060 CHD6Q8TD26 2715 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM72A0PK05 275 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 OR2M5A3KFT3 312 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ELOA3DA6NLF2 546 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-202ENST00000463060 G3V2T6 193 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PDLIM1O00151 329 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF208O43345 1280 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 KLF4O43474 513 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 CBLP22681 906 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 GDF1P27539 372 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 MAGEA5P43359 124 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 GFRA1P56159 465 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 CTBP2P56545 445 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PMP22Q01453 160 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ELOA3BQ3SY89 546 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 FGD3Q5JSP0 725 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 LPCAT4Q643R3 524 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ANKRD34AQ69YU3 496 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 C1orf94Q6P1W5 598 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 FAHD1Q6P587 224 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PCSK4Q6UW60 755 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 YRDCQ86U90 279 aaKnown RBP12.96□□□□□ -0.33
COL6A1-202ENST00000463060 SLC22A16Q86VW1 577 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ZDHHC13Q8IUH4 622 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 SIAH3Q8IW03 269 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 FAM109AQ8N4B1 249 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 Q8NA96 180 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ICA1LQ8NDH6 482 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ELOA3Q8NG57 546 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 OR5M1Q8NGP8 315 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 GIPC3Q8TF64 312 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PNPLA2Q96AD5 504 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 CIB1Q99828 191 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 SLC19A3Q9BZV2 496 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 COQ10BQ9H8M1 238 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PDP1Q9P0J1 537 aaPredicted RBP12.96□□□□□ -0.33
COL6A1-202ENST00000463060 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 DKKL1Q9UK85 242 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 TMCC3Q9ULS5 477 aa12.96□□□□□ -0.33
COL6A1-202ENST00000463060 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.34
COL6A1-202ENST00000463060 ZC3H12DA2A288 527 aaKnown RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 HTR3EA5X5Y0 456 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 SAC3D1A6NKF1 404 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FAM47E-STBD1D6RA91 191 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 SUSD5O60279 629 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FZD7O75084 574 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 E2F6O75461 281 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 WISP2O76076 250 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 CCNB2O95067 398 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 RASAL1O95294 804 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 GASTP01350 101 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 IGHG3P01860 377 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF23P17027 643 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 CHMP24386 653 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 CXCR1P25024 350 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FKBP2P26885 142 aaKnown RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 ELK4P28324 431 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PEX2P28328 305 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 OMPP47874 163 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PPP2R2BQ00005 443 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PRKCDQ05655 676 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 SLC10A1Q14973 349 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 TRIP10Q15642 601 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 INAQ16352 499 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 CMPK2Q5EBM0 449 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 WIPI1Q5MNZ9 446 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PPP4R4Q6NUP7 873 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PGBD2Q6P3X8 592 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 TTC33Q6PID6 262 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF730Q6ZMV8 503 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 TMPRSS11FQ6ZWK6 438 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 STK32CQ86UX6 486 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FAM98AQ8NCA5 519 aaKnown RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 OR10G2Q8NGC3 310 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PFN4Q8NHR9 129 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 STK35Q8TDR2 534 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 DTNBP1Q96EV8 351 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 FEVQ99581 238 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 GPA33Q99795 319 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 PIGQQ9BRB3 760 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 ARHGAP9Q9BRR9 750 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 C9orf16Q9BUW7 83 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 USE1Q9NZ43 259 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 SELENONQ9NZV5 590 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 CHRNA9Q9UGM1 479 aa12.95□□□□□ -0.34
COL6A1-202ENST00000463060 TMEFF2Q9UIK5 374 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 RPH3AQ9Y2J0 694 aaPredicted RBP12.95□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF337Q9Y3M9 751 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms